RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 RABL6Q3YEC7 729 aaPredicted RBP20.1■□□□□ 0.81
SMPD3-201ENST00000219334 ATG9AQ7Z3C6 839 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 MRPL46Q9H2W6 279 aaKnown RBP20.1■□□□□ 0.81
SMPD3-201ENST00000219334 ASAP2O43150 1006 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 DNAJC6O75061 913 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 ESRRAP11474 423 aaPredicted RBP20.1■□□□□ 0.81
SMPD3-201ENST00000219334 ARHGDIAP52565 204 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 POU5F1BQ06416 359 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 SCFD2Q8WU76 684 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 NCLNQ969V3 563 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 NFU1Q9UMS0 254 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 DFFAO00273 331 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 PRRG1O14668 218 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 CDH6P55285 790 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 PGBD3Q8N328 593 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 TRIM45Q9H8W5 580 aaPredicted RBP20.1■□□□□ 0.81
SMPD3-201ENST00000219334 PLEKHA5Q9HAU0 1116 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 GTSE1Q9NYZ3 720 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 PRR12Q9ULL5 1215 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 UBA6A0AVT1 1052 aaPredicted RBP20.1■□□□□ 0.81
SMPD3-201ENST00000219334 GOLGA8MH3BSY2 632 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 PDXKO00764 312 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 EMBQ6PCB8 327 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 CHST13Q8NET6 341 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 TRIM15Q9C019 465 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 SLC38A7Q9NVC3 462 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 TTC7AQ9ULT0 858 aaPredicted RBP20.1■□□□□ 0.81
SMPD3-201ENST00000219334 ADCY10Q96PN6 1610 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 SPARCL1Q14515 664 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 LBRQ14739 615 aaKnown RBP20.09■□□□□ 0.81
SMPD3-201ENST00000219334 FRMD5Q7Z6J6 570 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 PPP1R12AO14974 1030 aaPredicted RBP20.09■□□□□ 0.81
SMPD3-201ENST00000219334 ITGA4P13612 1032 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 FOXD4Q12950 439 aaPredicted RBP20.09■□□□□ 0.81
SMPD3-201ENST00000219334 TMEM132DQ14C87 1099 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 TBCCQ15814 346 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 GNASQ5JWF2 1037 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 LMBRD2Q68DH5 695 aaPredicted RBP20.09■□□□□ 0.81
SMPD3-201ENST00000219334 LZICQ8WZA0 190 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 NMT1P30419 496 aaKnown RBP20.09■□□□□ 0.81
SMPD3-201ENST00000219334 SNX17Q15036 470 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 AFF4Q9UHB7 1163 aaKnown RBP20.09■□□□□ 0.81
SMPD3-201ENST00000219334 PCDHB8Q9UN66 801 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 SRGAP2O75044 1071 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 RFC5P40937 340 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 HSP90AA5PQ58FG0 334 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 DCUN1D1Q96GG9 259 aa20.09■□□□□ 0.81
SMPD3-201ENST00000219334 CD4P01730 458 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 SLC15A2Q16348 729 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 PID1Q7Z2X4 250 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 TRAIPQ9BWF2 469 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 FAM96AQ9H5X1 160 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 CYP2C9P11712 490 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 FCGRTP55899 365 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 TPI1P60174 286 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 ZBTB41Q5SVQ8 909 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 ACAD11Q709F0 780 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 AGBL3Q8NEM8 1001 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 GLT1D1Q96MS3 346 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 CENPKQ9BS16 269 aa20.08■□□□□ 0.81
SMPD3-201ENST00000219334 F5H423 210 aaPredicted RBP20.08■□□□□ 0.8
SMPD3-201ENST00000219334 NR1H3Q13133 447 aa20.08■□□□□ 0.8
SMPD3-201ENST00000219334 RNF180Q86T96 592 aa20.08■□□□□ 0.8
SMPD3-201ENST00000219334 ASAP3Q8TDY4 903 aa20.08■□□□□ 0.8
SMPD3-201ENST00000219334 TBX3O15119 743 aa20.08■□□□□ 0.8
SMPD3-201ENST00000219334 MYO1DO94832 1006 aa20.08■□□□□ 0.8
SMPD3-201ENST00000219334 ASMTLO95671 621 aa20.08■□□□□ 0.8
SMPD3-201ENST00000219334 NR1D1P20393 614 aa20.08■□□□□ 0.8
SMPD3-201ENST00000219334 KCNA4P22459 653 aa20.08■□□□□ 0.8
SMPD3-201ENST00000219334 CCNYL1Q8N7R7 359 aa20.08■□□□□ 0.8
SMPD3-201ENST00000219334 PPM1NQ8N819 430 aa20.08■□□□□ 0.8
SMPD3-201ENST00000219334 PARD6BQ9BYG5 372 aa20.08■□□□□ 0.8
SMPD3-201ENST00000219334 ALKQ9UM73 1620 aa20.08■□□□□ 0.8
SMPD3-201ENST00000219334 CAPRIN1Q14444 709 aaKnown RBP20.07■□□□□ 0.8
SMPD3-201ENST00000219334 TAF11Q15544 211 aa20.07■□□□□ 0.8
SMPD3-201ENST00000219334 WNT8AQ9H1J5 351 aa20.07■□□□□ 0.8
SMPD3-201ENST00000219334 PDCD2Q16342 344 aaPredicted RBP20.07■□□□□ 0.8
SMPD3-201ENST00000219334 SAMD7Q7Z3H4 446 aa20.07■□□□□ 0.8
SMPD3-201ENST00000219334 RMDN2Q96LZ7 410 aa20.07■□□□□ 0.8
SMPD3-201ENST00000219334 ZNF512Q96ME7 567 aaPredicted RBP20.07■□□□□ 0.8
SMPD3-201ENST00000219334 DGKDQ16760 1214 aa20.07■□□□□ 0.8
SMPD3-201ENST00000219334 DCP1BQ8IZD4 617 aaKnown RBP20.07■□□□□ 0.8
SMPD3-201ENST00000219334 NRKQ7Z2Y5 1582 aa20.07■□□□□ 0.8
SMPD3-201ENST00000219334 RASA4BC9J798 803 aa20.07■□□□□ 0.8
SMPD3-201ENST00000219334 MAFGO15525 162 aa20.07■□□□□ 0.8
SMPD3-201ENST00000219334 RASA4O43374 803 aa20.07■□□□□ 0.8
SMPD3-201ENST00000219334 DNAJC8O75937 253 aaPredicted RBP20.07■□□□□ 0.8
SMPD3-201ENST00000219334 RAPGEF5Q92565 580 aa20.07■□□□□ 0.8
SMPD3-201ENST00000219334 C18orf8Q96DM3 657 aa20.07■□□□□ 0.8
SMPD3-201ENST00000219334 PRR29P0C7W0 189 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 CPT1AP50416 773 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 SNCBQ16143 134 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 FMR1NBQ8N0W7 255 aaPredicted RBP20.06■□□□□ 0.8
SMPD3-201ENST00000219334 TRIM55Q9BYV6 548 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 FGFR1OP2Q9NVK5 253 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 ERAP1Q9NZ08 941 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 HSPBP1Q9NZL4 362 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 THEGQ9P2T0 379 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 APOBEC2Q9Y235 224 aaKnown RBP20.06■□□□□ 0.8
SMPD3-201ENST00000219334 APOL1O14791 398 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms