RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 RMDN1Q96DB5 314 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 EDC3Q96F86 508 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 SENP7Q9BQF6 1050 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 AP1M1Q9BXS5 423 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 MMADHCQ9H3L0 296 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 USP17L3A6NCW0 530 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 USP17L4A6NCW7 530 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 LRRIQ3A6PVS8 624 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 APOL1O14791 398 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 RGL2O15211 777 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 TMED1Q13445 227 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 SLC30A9Q6PML9 568 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 CCNI2Q6ZMN8 369 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 USP17L1Q7RTZ2 530 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 PROCA1Q8NCQ7 364 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 TTLL11Q8NHH1 800 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 CABLES1Q8TDN4 633 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 FAM193BQ96PV7 902 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 FSD1LQ9BXM9 530 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 CCDC134Q9H6E4 229 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 PLEKHA5Q9HAU0 1116 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 AIPL1Q9NZN9 384 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 TRAF3IP3Q9Y228 551 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 PPME1Q9Y570 386 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 DCCP43146 1447 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 NALCNQ8IZF0 1738 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 GAS2O43903 313 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 MARK3P27448 753 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 OCRLQ01968 901 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 NFRKBQ6P4R8 1299 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 METTL16Q86W50 562 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 SCFD1Q8WVM8 642 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 OTUB1Q96FW1 271 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 MRPL4Q9BYD3 311 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 RANBP17Q9H2T7 1088 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 EPS8L2Q9H6S3 715 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 PRDM16Q9HAZ2 1276 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 ETNK1Q9HBU6 452 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 PAIP2BQ9ULR5 123 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 A0A0G2JND7 137 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 CCT8L1PA6NM43 557 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 ITKQ08881 620 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 TCP10Q12799 353 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 TBC1D10BQ4KMP7 808 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 TTC39BQ5VTQ0 682 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 E4F1Q66K89 784 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 HEATR6Q6AI08 1181 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 FRA10AC1Q70Z53 315 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 NUDCD3Q8IVD9 361 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 FAM9CQ8IZT9 166 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 CMTR1Q8N1G2 835 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 CXorf38Q8TB03 319 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 ZNF473Q8WTR7 871 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 ACAP3Q96P50 834 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 DDX50Q9BQ39 737 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 TRIM9Q9C026 710 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 ZWILCHQ9H900 591 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 AP4S1Q9Y587 144 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 H0Y626 953 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 TM9SF1O15321 606 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 TRIM16O95361 564 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 AARSP49588 968 aaKnown RBP eCLIP4.67□□□□□ -1.663e-6■■■■■ 61.8
CHD9-201ENST00000219084 POLE2P56282 527 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 MTMR1Q13613 665 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 E2F5Q15329 346 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 SYCP2LQ5T4T6 812 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 TRIM67Q6ZTA4 783 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 ADAT2Q7Z6V5 191 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 TBC1D1Q86TI0 1168 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 ADSSL1Q8N142 457 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 GPD1LQ8N335 351 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 PCYOX1LQ8NBM8 494 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 FAM192AQ9GZU8 254 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 KCNF1Q9H3M0 494 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 KIF17Q9P2E2 1029 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 ZNF219Q9P2Y4 722 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 TBK1Q9UHD2 729 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 SLC13A4Q9UKG4 626 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 NVLO15381 856 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 ZC3H11AO75152 810 aaKnown RBP eCLIP4.67□□□□□ -1.66
CHD9-201ENST00000219084 ZMYND10O75800 440 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 BRAFP15056 766 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 CA8P35219 290 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 GPS1Q13098 491 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 CYLC2Q14093 348 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 PROSER3Q2NL68 480 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 TKFCQ3LXA3 575 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 RASSF3Q86WH2 238 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 ZNF555Q8NEP9 628 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 CCDC126Q96EE4 140 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 MAGEB18Q96M61 343 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 MRPL1Q9BYD6 325 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 OSBPL8Q9BZF1 889 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 PHACTR1Q9C0D0 580 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 MRPL46Q9H2W6 279 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 HGSO14964 777 aaPredicted RBP4.66□□□□□ -1.66
CHD9-201ENST00000219084 LARGE1O95461 756 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 RPLP2P05387 115 aaKnown RBP4.66□□□□□ -1.66
CHD9-201ENST00000219084 H2AFXP16104 143 aaPredicted RBP4.66□□□□□ -1.66
CHD9-201ENST00000219084 QARSP47897 775 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms