RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 IGKV6D-41A0A0C4DH26 115 aa13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 GTPBP10A4D1E9 387 aaKnown RBP13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 LSP1P33241 339 aa13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 MDH1P40925 334 aaKnown RBP13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 SOX10P56693 466 aa13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 YWHAEP62258 255 aaKnown RBP13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 CXCL9Q07325 125 aa13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 DHX34Q14147 1143 aaKnown RBP13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 TRIM6Q9C030 488 aaPredicted RBP13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 KIAA1586Q9HCI6 787 aa13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 TTC7AQ9ULT0 858 aaPredicted RBP13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 PCDHGC5Q9Y5F6 944 aa13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 GNA15P30679 374 aa13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 ADCY2Q08462 1091 aa13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 CTAGE3PQ8IX95 158 aa13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 BBOF1Q8ND07 529 aa13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 AENQ8WTP8 325 aaKnown RBP13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 FERMT1Q9BQL6 677 aa13.22□□□□□ -0.29
TM9SF4-201ENST00000217315 MYH7P12883 1935 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 HYIQ5T013 277 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 HGSNATQ68CP4 663 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 TATDN1Q6P1N9 297 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 SH3BP5LQ7L8J4 393 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 PALM2Q8IXS6 379 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 GDAP1Q8TB36 358 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 SYTL5Q8TDW5 730 aaPredicted RBP13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 FBF1Q8TES7 1133 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 SLC5A5Q92911 643 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 ZKSCAN4Q969J2 545 aaPredicted RBP13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 ERP44Q9BS26 406 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 TEX13BQ9BXU2 312 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 TBX20Q9UMR3 447 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 MYH6P13533 1939 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 PSMD10O75832 226 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 NOL4O94818 638 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 VIL1P09327 827 aaKnown RBP13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 GUCY2CP25092 1073 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 CLK2P49760 499 aaKnown RBP13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 PRKCEQ02156 737 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 PPP2R5CQ13362 524 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 PPP1R21Q6ZMI0 780 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 CNKSR2Q8WXI2 1034 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.21□□□□□ -0.297e-9■■■■■ 72.6
TM9SF4-201ENST00000217315 DCPSQ96C86 337 aaKnown RBP13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 HSD17B14Q9BPX1 270 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 ELAC2Q9BQ52 826 aaKnown RBP13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 MOV10L1Q9BXT6 1211 aaKnown RBP13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 PPP1R9AQ9ULJ8 1098 aa13.21□□□□□ -0.29
TM9SF4-201ENST00000217315 LDHAP00338 332 aaKnown RBP13.21□□□□□ -0.3
TM9SF4-201ENST00000217315 CLTAP09496 248 aa13.21□□□□□ -0.3
TM9SF4-201ENST00000217315 TMED2Q15363 201 aa13.21□□□□□ -0.3
TM9SF4-201ENST00000217315 ZCWPW2Q504Y3 356 aa13.21□□□□□ -0.3
TM9SF4-201ENST00000217315 HP1BP3Q5SSJ5 553 aaPredicted RBP13.21□□□□□ -0.3
TM9SF4-201ENST00000217315 FOXR1Q6PIV2 292 aa13.21□□□□□ -0.3
TM9SF4-201ENST00000217315 ZNF280CQ8ND82 737 aa13.21□□□□□ -0.3
TM9SF4-201ENST00000217315 CCT8L2Q96SF2 557 aa13.21□□□□□ -0.3
TM9SF4-201ENST00000217315 FAM118BQ9BPY3 351 aa13.21□□□□□ -0.3
TM9SF4-201ENST00000217315 CALN1Q9BXU9 219 aa13.21□□□□□ -0.3
TM9SF4-201ENST00000217315 STK38LQ9Y2H1 464 aa13.21□□□□□ -0.3
TM9SF4-201ENST00000217315 MYH3P11055 1940 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 CYP3A4P08684 503 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 NPTX2P47972 431 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 ERVK-9P63128 1117 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 ZRSR2Q15696 482 aaKnown RBP13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 ACTRT1Q8TDG2 376 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 MRIQ9BWK5 157 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 KLHL14Q9P2G3 628 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 TGFB1I1O43294 461 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 FDX1P10109 184 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 YARSP54577 528 aaKnown RBP13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 LMNB2Q03252 620 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 IRF2BP2Q7Z5L9 587 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 ERICH1Q86X53 443 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 AGBL3Q8NEM8 1001 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 TAS1R2Q8TE23 839 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 ANKRD36BP1Q96IX9 119 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 BCAS3Q9H6U6 928 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 FRMPD4Q14CM0 1322 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 SYF2O95926 243 aaKnown RBP13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 KRT17Q04695 432 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 LRRC14Q15048 493 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 MAPK6Q16659 721 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 XKR3Q5GH77 459 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 TIPINQ9BVW5 301 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 TMEM8AQ9HCN3 771 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 KLHL11Q9NVR0 708 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 AKT3Q9Y243 479 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 TUBGCP6Q96RT7 1819 aa13.2□□□□□ -0.3
TM9SF4-201ENST00000217315 ROBO1Q9Y6N7 1651 aa13.19□□□□□ -0.3
TM9SF4-201ENST00000217315 PI4K2BG5E9Z4 385 aa13.19□□□□□ -0.3
TM9SF4-201ENST00000217315 PHF2O75151 1096 aa13.19□□□□□ -0.3
TM9SF4-201ENST00000217315 P4HA1P13674 534 aa13.19□□□□□ -0.3
TM9SF4-201ENST00000217315 ABCD1P33897 745 aa13.19□□□□□ -0.3
TM9SF4-201ENST00000217315 SPDYE2Q495Y8 402 aa13.19□□□□□ -0.3
TM9SF4-201ENST00000217315 NUGGCQ68CJ6 796 aa13.19□□□□□ -0.3
TM9SF4-201ENST00000217315 DHX38Q92620 1227 aaKnown RBP13.19□□□□□ -0.3
TM9SF4-201ENST00000217315 KAT5Q92993 513 aa13.19□□□□□ -0.3
TM9SF4-201ENST00000217315 PDCD2LQ9BRP1 358 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms