RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PLIN5Q00G26 463 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 ARMCX4Q5H9R4 360 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 P3H2Q8IVL5 708 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 KRR1Q13601 381 aaKnown RBP15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 SNRNP27Q8WVK2 155 aaKnown RBP15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 CYP27A1Q02318 531 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 CNGA2Q16280 664 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 TOGARAM2Q6ZUX3 1019 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 RHPN2Q8IUC4 686 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 TMC2Q8TDI7 906 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 CDHR1Q96JP9 859 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 PSAPP07602 524 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 TRADDQ15628 312 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 C16orf89Q6UX73 402 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 IFNEQ86WN2 208 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 SYCP2Q9BX26 1530 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 SNPHO15079 494 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 CAND2O75155 1236 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 ATP6V1B1P15313 513 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 SERPINB4P48594 390 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 SKIV2LQ15477 1246 aaKnown RBP15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 NFIL3Q16649 462 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 EXD1Q8NHP7 514 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 KRCC1Q9NPI7 259 aaPredicted RBP15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 BTKQ06187 659 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 NEK10Q6ZWH5 1172 aa15.41■□□□□ 0.06
SPTLC2-201ENST00000216484 PNMA6EA0A0J9YXQ4 647 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 ATP9BO43861 1147 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 PLCG1P19174 1290 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 NCF4Q15080 339 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 PANX2Q96RD6 677 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 REXO4Q9GZR2 422 aaKnown RBP15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 FAM49AQ9H0Q0 323 aaPredicted RBP15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 PKP3Q9Y446 797 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 IGF1RP08069 1367 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 A0A087WWV3 80 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 SGSM1Q2NKQ1 1148 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 DAB2IPQ5VWQ8 1189 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 STX12Q86Y82 276 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 SNX31Q8N9S9 440 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 TBCKQ8TEA7 893 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 LRRIQ3A6PVS8 624 aaPredicted RBP15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 PEX3P56589 373 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 COG2Q14746 738 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 PHKG1Q16816 387 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 G2E3Q7L622 706 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 SIK2Q9H0K1 926 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 ADGRL1O94910 1474 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 PDZK1P1A8MUH7 402 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 ZBTB7BO15156 539 aaPredicted RBP15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 PEX1O43933 1283 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 PPP6R2O75170 966 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 PLA2G4BP0C869 781 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 FBXO38Q6PIJ6 1188 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 CALML6Q8TD86 181 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 SNF8Q96H20 258 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 SPON2Q9BUD6 331 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 PDCD10Q9BUL8 212 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 EMILIN3Q9NT22 766 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 BTDP43251 543 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 PCYOX1LQ8NBM8 494 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 DHX36Q9H2U1 1008 aaKnown RBP15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 ADAMTS1Q9UHI8 967 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 CCDC188H7C350 402 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 CALB1P05937 261 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 TRIM49P0CI25 452 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 TRIM49CP0CI26 452 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 AASDHQ4L235 1098 aaPredicted RBP15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 NLRP14Q86W24 1093 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 EDC3Q96F86 508 aaKnown RBP15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 FANCEQ9HB96 536 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 SAMSN1Q9NSI8 373 aaKnown RBP15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 ARAP1Q96P48 1450 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 MYH3P11055 1940 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 FGAP02671 866 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 MYL3P08590 195 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 GYG1P46976 350 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 NFX1Q12986 1120 aaKnown RBP15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 ZNF667Q5HYK9 610 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 TWF2Q6IBS0 349 aaKnown RBP15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 KLHL17Q6TDP4 642 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 LONP2Q86WA8 852 aa15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 RPRD1BQ9NQG5 326 aaKnown RBP15.4■□□□□ 0.06
SPTLC2-201ENST00000216484 GOLGA8TH3BQL2 631 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 AKT1P31749 480 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 ATAD3BQ5T9A4 648 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 TMEM270Q6UE05 265 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 SUCLG2Q96I99 432 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 CNDP1Q96KN2 507 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 PCSK1NQ9UHG2 260 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 RSPH10B2B2RC85 870 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 RSPH10BP0C881 870 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 FAM45BPQ6NSW5 357 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 EPN3Q9H201 632 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 TJP2Q9UDY2 1190 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 CNOT8Q9UFF9 292 aaKnown RBP15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 HUS1O60921 280 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 EPB42P16452 691 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 BCAMP50895 628 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 SGO1Q5FBB7 561 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms