RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
EFNB1-201ENST00000204961 ANKRD62A6NC57 917 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 SPAG7O75391 227 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 GH1P01241 217 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 YWHABP31946 246 aaKnown RBP16.19■□□□□ 0.18
EFNB1-201ENST00000204961 CHKAP35790 457 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 ADCY8P40145 1251 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 GPC5P78333 572 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 CALCOCO2Q13137 446 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 DLK2Q6UY11 383 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 CEP170P1Q96L14 293 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 POLR3CQ9BUI4 534 aaPredicted RBP16.19■□□□□ 0.18
EFNB1-201ENST00000204961 RAB17Q9H0T7 212 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 ASTN2O75129 1339 aaPredicted RBP16.19■□□□□ 0.18
EFNB1-201ENST00000204961 CCDC188H7C350 402 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 TMEM253P0C7T8 217 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 KRT10P13645 584 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 MTERF2Q49AM1 385 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 SLC5A5Q92911 643 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 FIZ1Q96SL8 496 aa16.19■□□□□ 0.18
EFNB1-201ENST00000204961 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.19■□□□□ 0.18
EFNB1-201ENST00000204961 ORC1Q13415 861 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 SLC40A1Q9NP59 571 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 FAM114A2Q9NRY5 505 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 MRPL11Q9Y3B7 192 aaKnown RBP16.18■□□□□ 0.18
EFNB1-201ENST00000204961 WDR91A4D1P6 747 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 POC1B-GALNT4F8VUJ3 575 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 ADRA2BP18089 450 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 PRKCIP41743 596 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 RPS6P62753 249 aaKnown RBP16.18■□□□□ 0.18
EFNB1-201ENST00000204961 SNRNP35Q16560 246 aaKnown RBP16.18■□□□□ 0.18
EFNB1-201ENST00000204961 RNF207Q6ZRF8 634 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 CHURC1Q8WUH1 139 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 TMEM143Q96AN5 459 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 ZBTB45Q96K62 511 aaPredicted RBP16.18■□□□□ 0.18
EFNB1-201ENST00000204961 FGFR1OP2Q9NVK5 253 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 TRIM33Q9UPN9 1127 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 STXBP5LQ9Y2K9 1186 aa16.18■□□□□ 0.18
EFNB1-201ENST00000204961 RASGRF2O14827 1237 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 MAPK4P31152 587 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 MAPK7Q13164 816 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 TATDN1Q6P1N9 297 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 SRRM1Q8IYB3 904 aaKnown RBP16.17■□□□□ 0.18
EFNB1-201ENST00000204961 CRYGNQ8WXF5 182 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 RMDN3Q96TC7 470 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 HERPUD2Q9BSE4 406 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 TCHPQ9BT92 498 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 ZNF70Q9UC06 446 aaPredicted RBP16.17■□□□□ 0.18
EFNB1-201ENST00000204961 BTAF1O14981 1849 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 PIK3R2O00459 728 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 KIAA0391O15091 583 aaKnown RBP16.17■□□□□ 0.18
EFNB1-201ENST00000204961 ZSCAN5DPP0CG00 497 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 NUGGCQ68CJ6 796 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 SWSAP1Q6NVH7 229 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 HVCN1Q96D96 273 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 OLFML3Q9NRN5 406 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 R3HDM2Q9Y2K5 976 aaKnown RBP16.17■□□□□ 0.18
EFNB1-201ENST00000204961 RRM1P23921 792 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 CNGA1P29973 690 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 RARRES1P49788 294 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 KRT17Q04695 432 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 RASA3Q14644 834 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 C10orf76Q5T2E6 689 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 SCARA5Q6ZMJ2 495 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 SUGP1Q8IWZ8 645 aaKnown RBP16.17■□□□□ 0.18
EFNB1-201ENST00000204961 LRRN4Q8WUT4 740 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 BORCS6Q96GS4 357 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 XPO6Q96QU8 1125 aaKnown RBP16.17■□□□□ 0.18
EFNB1-201ENST00000204961 ALG13Q9NP73 1137 aaKnown RBP16.17■□□□□ 0.18
EFNB1-201ENST00000204961 GABBR1Q9UBS5 961 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 SEPT9Q9UHD8 586 aaPredicted RBP16.17■□□□□ 0.18
EFNB1-201ENST00000204961 RASAL2Q9UJF2 1139 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 GJA3Q9Y6H8 435 aa16.17■□□□□ 0.18
EFNB1-201ENST00000204961 BANF1O75531 89 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 ETS1P14921 441 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 EPS8L1Q8TE68 723 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 KMT5AQ9NQR1 393 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 SAE1Q9UBE0 346 aaPredicted RBP16.16■□□□□ 0.18
EFNB1-201ENST00000204961 MTRF1LQ9UGC7 380 aaKnown RBP16.16■□□□□ 0.18
EFNB1-201ENST00000204961 PTENP60484 403 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 ARHGEF16Q5VV41 709 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 SUPT20HQ8NEM7 779 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 ACCSQ96QU6 501 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 KLC4Q9NSK0 619 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 SLC12A6Q9UHW9 1150 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 TRPC5Q9UL62 973 aaPredicted RBP16.16■□□□□ 0.18
EFNB1-201ENST00000204961 L3MBTL1Q9Y468 752 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 RIPK3Q9Y572 518 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 TCP11X1B4DZS4 312 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 TBX3O15119 743 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 SLC16A3O15427 465 aaKnown RBP16.16■□□□□ 0.18
EFNB1-201ENST00000204961 CPP00450 1065 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 ZBTB33Q86T24 672 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 BSNDQ8WZ55 320 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 ZSWIM1Q9BR11 485 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 MXRA8Q9BRK3 442 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 SLITRK6Q9H5Y7 841 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 ABCF3Q9NUQ8 709 aa16.16■□□□□ 0.18
EFNB1-201ENST00000204961 TRAPPC3O43617 180 aa16.15■□□□□ 0.18
EFNB1-201ENST00000204961 CCDC172P0C7W6 258 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms