RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 ARHGEF6Q15052 776 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 PREPLQ4J6C6 727 aaPredicted RBP12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 FAM102BQ5T8I3 360 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 MIER3Q7Z3K6 550 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 SLC35G2Q8TBE7 412 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 PYROXD1Q8WU10 500 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 GRAMD1AQ96CP6 724 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 ALG13Q9NP73 1137 aaKnown RBP12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 PNMA3Q9UL41 463 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 SHPRHQ149N8 1683 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 PLCH1Q4KWH8 1693 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 NDC80O14777 642 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 ARL1P40616 181 aaPredicted RBP12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 TRPC3Q13507 836 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 CUL3Q13618 768 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 KYNUQ16719 465 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 CNOT8Q9UFF9 292 aaKnown RBP12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 ZNF233A6NK53 670 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 BASP1P80723 227 aaKnown RBP12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 TROAPQ12815 778 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 C3orf20Q8ND61 904 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 IWS1Q96ST2 819 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 PABPC3Q9H361 631 aaKnown RBP12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 RAVER2Q9HCJ3 691 aaKnown RBP12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 GINM1Q9NU53 330 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 USP17L15C9J2P7 530 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 USP17L13C9JLJ4 530 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 USP17L11C9JVI0 530 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 USP17L18D6R9N7 530 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 USP17L22D6RA61 530 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 USP17L17D6RBQ6 530 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 USP17L19D6RCP7 530 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 USP17L20D6RJB6 530 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 GOLGA8SH3BPF8 625 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 GOLGA8MH3BSY2 632 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 GCLMP48507 274 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 MRPS35P82673 323 aaKnown RBP12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 USP17L24Q0WX57 530 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 DYNC1I2Q13409 638 aaKnown RBP12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 DEFB115Q30KQ5 88 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 FIGNQ5HY92 759 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 C1orf146Q5VVC0 180 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 USP17L6PQ6QN14 398 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 ZFPM1Q8IX07 1006 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 FBXO25Q8TCJ0 367 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 SMYD3Q9H7B4 428 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 SLC4A7Q9Y6M7 1214 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 GOLGA8IPA6NC78 632 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 LRRC10BA6NIK2 292 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 GOLGA8JA6NMD2 632 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 HOXA7P31268 230 aaPredicted RBP12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 STAT2P52630 851 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 ERVK-9P63128 1117 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 GPATCH4Q5T3I0 446 aaKnown RBP12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 EPS8L3Q8TE67 593 aaKnown RBP12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 KAT2BQ92831 832 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 FAM217BQ9NTX9 383 aaPredicted RBP12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 COMMD10Q9Y6G5 202 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 CNTNAP5Q8WYK1 1306 aa12.29□□□□□ -0.44
DNMT3B-201ENST00000201963 NPHP3-ACAD11A0A0J9YXS1 232 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 F5H6K3 240 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 NVLO15381 856 aaKnown RBP12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 ORC4O43929 436 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 IL1R1P14778 569 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 CA8P35219 290 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 SERPINB4P48594 390 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 EPHB1P54762 984 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 KRT17Q04695 432 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 KLRC3Q07444 240 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 CTTNQ14247 550 aaKnown RBP12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 NAALADL2Q58DX5 795 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 TMCO4Q5TGY1 634 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 CENPUQ71F23 418 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 POMGNT1Q8WZA1 660 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 KDM4CQ9H3R0 1056 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 FAM237AA0A1B0GTK4 181 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 OPLAHO14841 1288 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 ITGA4P13612 1032 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 KCNA3P22001 575 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 ARFIP2P53365 341 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 CCDC14Q49A88 953 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 NXNQ6DKJ4 435 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 AGGF1Q8N302 714 aaeCLIP12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 FBXL16Q8N461 479 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 AMNQ9BXJ7 453 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 FAM129AQ9BZQ8 928 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 SLC5A4Q9NY91 659 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 NAGPAQ9UK23 515 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 LMO7Q8WWI1 1683 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 KRT1P04264 644 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 VIL1P09327 827 aaKnown RBP12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 STAT3P40763 770 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 ZNF844Q08AG5 666 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 GRM4Q14833 912 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 USP50Q70EL3 339 aaPredicted RBP12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 ADGRA1Q86SQ6 560 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 C4orf33Q8N1A6 199 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 ZNF564Q8TBZ8 553 aaPredicted RBP12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 BCAP29Q9UHQ4 241 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms