RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Pcdhgc5Q91XW9 944 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Sv2aQ9JIS5 742 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Scgb2b11A0A087WR49 112 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 TdgP56581 421 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Myo1fP70248 1099 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Mpzl3Q3V3F6 237 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Rhox12Q4TU81 186 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Lrig2Q52KR2 1054 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Rnf139Q7TMV1 668 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Rpf1Q7TND5 349 aaKnown RBP8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Ctdp1Q7TSG2 960 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Zbed4Q80WQ9 1168 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Trim65Q8BFW4 522 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Rpp40Q8R1F9 363 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Arhgap8Q9CXP4 425 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Q9D2Q3 444 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Usp29Q9ES63 869 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Spint1Q9R097 507 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Rnf103Q9R1W3 683 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Mbtps1Q9WTZ2 1052 aa8.1□□□□□ -1.11
Usp40-204ENSMUST00000187758 Ttc13A0A1L1SSC7 844 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Gm9857F7CXR1 130 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Chrna1P04756 457 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Ifnar1P33896 590 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Stat4P42228 749 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 PuraP42669 321 aaKnown RBP8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Yy1Q00899 414 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Arglu1Q3UL36 271 aaKnown RBP8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Sec31aQ3UPL0 1230 aaKnown RBP8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Tmem232Q5K6N0 675 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Ccdc42Q5SV66 316 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Hspa4Q61316 841 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Cep70Q6IQY5 616 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Mettl25Q6NXH8 597 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Mapk15Q80Y86 549 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Leg1Q8C6C9 337 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Olfr1494Q8VGP8 315 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Nmrk1Q91W63 195 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Tlr2Q9QUN7 784 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Maged1Q9QYH6 775 aaKnown RBP8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Prpf40aQ9R1C7 953 aaKnown RBP8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Pds5aQ6A026 1332 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Gm10110D3Z5M2 615 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Gimd1E9PW74 217 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Kng1O08677 661 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Alkbh1P0CB42 389 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Pola2P33611 600 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 VegfaQ00731 214 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 NntQ61941 1086 aaKnown RBP8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Phlda1Q62392 405 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Ntan1Q64311 310 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Pla2g4cQ64GA5 597 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Olfr392Q7TRX6 312 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Slc13a4Q8BZ82 625 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Klra17Q9JMA4 273 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Zfp457L7N1X4 647 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Tnnc2P20801 160 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Gjb1P28230 283 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Cntnap5bQ0V8T8 1292 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 TfrcQ62351 763 aaKnown RBP8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Cyp2c29Q64458 490 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Znf771Q8BJ90 317 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Qsox1Q8BND5 748 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Pkn2Q8BWW9 983 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Agbl2Q8CDK2 862 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Lrrc45Q8CIM1 670 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Stxbp5Q8K400 1152 aaKnown RBP8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Mzb1Q9D8I1 188 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Igdcc4Q9EQS9 1252 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Elf2Q9JHC9 593 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Prmt2Q9R144 448 aa8.09□□□□□ -1.11
Usp40-204ENSMUST00000187758 Slc6a21A0A1B0GSD2 748 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Unc13dB2RUP2 1085 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 DgkkE9Q7N4 1118 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Gm20503G3UZK1 150 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Gad1P48318 593 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Ccr5P51682 354 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 SpoplQ2M2N2 392 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Srebf2Q3U1N2 1130 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Tmtc1Q3UV71 942 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Zbtb8osQ505B7 168 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Stxbp5lQ5DQR4 1185 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Zcchc2Q69ZB8 1166 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Lrig3Q6P1C6 1117 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Lrrn2Q6PHP6 730 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Otud6bQ8K2H2 294 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Tmco4Q91WU4 631 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Sppl3Q9CUS9 384 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Tpcn1Q9EQJ0 817 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Trpc3Q9QZC1 836 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Tnfrsf10bQ9QZM4 381 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 SprtnG3X912 497 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 4930544D05RikJ3QK56 214 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 DtnbO70585 659 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Tap2P36371 702 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Ndufs6P52503 116 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Tcaf3Q6QR59 914 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Fam160b1Q8CDM8 764 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Ap3m2Q8R2R9 418 aa8.08□□□□□ -1.12
Usp40-204ENSMUST00000187758 Ccdc12Q8R344 166 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms