RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Anxa9Q9JHQ0 345 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Pard6bQ9JK83 371 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Acnat1A2AKK5 416 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gm8994E9PV04 411 aaKnown RBP16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Serpina5P70458 405 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Zbtb17Q60821 794 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Zhx2Q8C0C0 836 aaKnown RBP16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Bag5Q8CI32 447 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Tbc1d22aQ8R5A6 516 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Cadm1Q8R5M8 456 aaKnown RBP16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 BrdtQ91Y44 956 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Chmp2aQ9DB34 222 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ccdc22Q9JIG7 627 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 DnmbpQ6TXD4 1580 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Usp31E9Q6Y8 1344 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Lrrc63A6H694 637 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Fam129cD3YZB0 591 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Rfpl4bJ3QPR6 266 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Acot6Q32Q92 419 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Nfe2l2Q60795 597 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Grm4Q68EF4 912 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Tlr13Q6R5N8 991 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Olfr397Q8VEZ6 315 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Tc2nQ91XT6 489 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Psmd10Q9Z2X2 231 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Herc3A6H6S0 1050 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Pdzd8B9EJ80 1147 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Vamp7P70280 220 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ttf2Q5NC05 1138 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ttc1Q91Z38 292 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Drap1Q9D6N5 205 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Serpinb3aG3X9V8 387 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Zfp850J3QPC5 689 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Q3TQQ9 903 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Tpd52Q62393 224 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 P2ry10Q8BFU7 328 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Sept10Q8C650 452 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Dclre1bQ8C7W7 541 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Tceal1Q921P9 165 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Large1Q9Z1M7 756 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gm36028A0A0U1RPM1 299 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 RalaP63321 206 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 GmncQ3URY2 333 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Itih3Q61704 889 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Nlrp4eQ66X19 978 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Dennd2cQ6P9P8 914 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ddx42Q810A7 929 aaKnown RBP16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Fam83aQ8K2P2 436 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Snapc2Q91XA5 359 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ehbp1l1Q99MS7 1716 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 1700122O11RikJ3QPW6 241 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ifnb1P01575 182 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Atoh1P48985 351 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 RnaselQ05921 735 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Srek1ip1Q4V9W2 153 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Arhgap15Q811M1 481 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Stap2Q8R0L1 411 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 MlphQ91V27 590 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Hdac11Q91WA3 347 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Wars2Q9CYK1 360 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Noxred1Q9D3S5 366 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Cd2apQ9JLQ0 637 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 BcamQ9R069 622 aa16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Xrn1P97789 1719 aaKnown RBP16.69■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Rhot1Q8BG51 631 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Cse1lQ9ERK4 971 aaKnown RBP16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 HunkO88866 714 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 RaraP11416 462 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Cops2P61202 443 aaKnown RBP16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 GclcP97494 637 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Muc1Q02496 630 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Chrna5Q2MKA5 467 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ifnl2Q4VK74 193 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Znf827Q505G8 1078 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 1700129C05RikQ9CQ77 218 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Myo1hQ9D6A1 958 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Mad2l2Q9D752 211 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 XdhQ00519 1335 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ttll10A4Q9F3 704 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gsdmc4Q3TR54 480 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Carmil2Q3V3V9 1296 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Thumpd2Q9CZB3 528 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 CenpsQ9D084 142 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Apol11bE9PUZ0 337 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 1700011I03RikE9PYL8 271 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Stam2O88811 523 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Runx2Q08775 607 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 CybbQ61093 570 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Pip4k2cQ91XU3 421 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ugp2Q91ZJ5 508 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Rpf2Q9JJ80 306 aaKnown RBP16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Nek3Q9R0A5 511 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Serpinb6cW4VSP4 379 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Itpripl1A2ASA8 547 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 DgkkE9Q7N4 1118 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Cyp2d11P24457 504 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 NfixP70257 488 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Tnni3kQ5GIG6 834 aa16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Dpf2Q61103 391 aaKnown RBP16.68■□□□□ 0.26
Clcn3-203ENSMUST00000093490 HiraQ61666 1015 aa16.68■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms