RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 IscuQ9D7P6 168 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ly6iQ9WU67 134 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Rrm1P07742 792 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Cst8P32766 142 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Cyfip2Q5SQX6 1253 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ipo5Q8BKC5 1097 aaKnown RBP17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Tmem161bQ8C2L6 487 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Vps36Q91XD6 386 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Syngap1F6SEU4 1340 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Atrnl1Q6A051 1378 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Vmn2r15L7N2A0 855 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Hmgb2P30681 210 aaKnown RBP17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Psmd1Q3TXS7 953 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Clul1Q3ZRW6 464 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ankfy1Q810B6 1169 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ccdc134Q8C7V8 229 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 StrcQ8VIM6 1809 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Col2a1P28481 1487 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Mmrn1B2RPV6 1210 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Myo1eE9Q634 1107 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Pkn1P70268 946 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Zfp957Q3UT76 567 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Mtus1Q5HZI1 1210 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 SpdyaQ5IBH7 310 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Pick1Q62083 416 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Rsad2Q8CBB9 362 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Wrap53Q8VC51 532 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ddx39aQ8VDW0 427 aaKnown RBP17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Zmynd10Q99ML0 440 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Tdrd1Q99MV1 1172 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Znf654Q9DAU9 571 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Snx1Q9WV80 522 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Stat2Q9WVL2 923 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Tex13c2A0A0G2JGA3 530 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Pon1P52430 355 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Gprin1Q3UNH4 932 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Gm10488Q4KL05 212 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 FancbQ5XJY6 703 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 StilQ60988 1262 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Trim21Q62191 470 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Vat1lQ80TB8 417 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Znf771Q8BJ90 317 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Slc9a9Q8BZ00 644 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Fkbp6Q91XW8 327 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Mettl16Q9CQG2 553 aaKnown RBP17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Mcur1Q9CXD6 340 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Gpihbp1Q9D1N2 228 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Rnf225Q9D7D1 332 aa17.17■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Alkbh1P0CB42 389 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Rgs9bpQ148R9 237 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Znf652Q5DU09 608 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Tom1l2Q5SRX1 507 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Fbxw10Q5SUS0 1030 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Vav2Q60992 868 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ehbp1Q69ZW3 1231 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Slc12a6Q924N4 1150 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Fmnl1Q9JL26 1094 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Apba3O88888 571 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 TxkP42682 527 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Mmp20P57748 482 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Odr4Q4PJX1 447 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Enoph1Q8BGB7 257 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Proser2Q8C5R2 471 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Kbtbd13Q8C828 458 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Tti1Q91V83 1085 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Tnpo2Q99LG2 887 aaKnown RBP17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Mrpl2Q9D773 306 aaKnown RBP17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Klc4Q9DBS5 619 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Znf394Q9Z1D9 521 aa17.16■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Cfap70D3YVL2 1141 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Pex5O09012 639 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 AfmO89020 608 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Marcksl1P28667 200 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 PklrP53657 574 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 VegfaQ00731 214 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Oog4Q4G0C7 502 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ccdc125Q5U465 500 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Fmnl3Q6ZPF4 1028 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Nsun6Q7TS68 476 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ccdc137Q8R0K4 290 aaKnown RBP17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 1700016D06RikQ9DAA5 166 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Rnf6Q9DBU5 667 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Gm3182K7N6T8 263 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ifnb1P01575 182 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Znf583Q3V080 568 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Cnot10Q8BH15 744 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Rassf10Q8BL43 508 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Slc4a7Q8BTY2 1034 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Rint1Q8BZ36 792 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Actl9Q8CG27 415 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Grhl1Q921D9 618 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ly75Q60767 1723 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Unc13dB2RUP2 1085 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Magea1O89006 320 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Magea5O89009 320 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Lrrc14Q8VC16 493 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Trmt10bQ9D075 318 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Tgm5Q9D7I9 724 aa17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Gtf2ird1Q9JI57 1104 aaKnown RBP17.15■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Magea2Q9R2A2 320 aa17.15■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms