RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Nlrp4aQ8BU40 982 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Fbxl5Q8C2S5 690 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Pde10aQ8CA95 790 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Twf1Q91YR1 350 aaKnown RBP10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Abtb1Q99LJ2 478 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Mms22lB1AUR6 1238 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Mt-CybP00158 381 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Znf746Q3U133 652 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Q3UJP5 209 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tdrd7Q8K1H1 1086 aaKnown RBP10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Yipf1Q91VU1 306 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rrp15Q9CYX7 281 aaKnown RBP10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ndc80Q9D0F1 642 aaKnown RBP10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tktl2Q9D4D4 627 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Chit1Q9D7Q1 464 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ppp1r2Q9DCL8 206 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Psmd10Q9Z2X2 231 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Lrrc4bP0C192 709 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ankmy2Q3TPE9 440 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 ScocQ78YZ6 125 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Olfr119Q7TRJ5 321 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Svs3bQ8BZH8 265 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Snx16Q8C080 344 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Leng8Q8CBY3 785 aaKnown RBP10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 TwnkQ8CIW5 685 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Olfr397Q8VEZ6 315 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Agap3Q8VHH5 910 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 FdpsQ920E5 353 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Nt5c3aQ9D020 331 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Pabpc6Q9D4E6 643 aaKnown RBP10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 6030498E09RikB1AX85 169 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 LmnaP48678 665 aaKnown RBP10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Psma2P49722 234 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Actr2P61161 394 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Hsdl2Q2TPA8 490 aaKnown RBP10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tmed8Q3UHI4 326 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Skap1Q3UUV5 355 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 HiraQ61666 1015 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 LdhdQ7TNG8 484 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Trim47Q8C0E3 641 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Fam118bQ8C569 351 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gpc5Q8CAL5 572 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rassf7Q9DD19 359 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 ParvaQ9EPC1 372 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Plod1Q9R0E2 728 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Setd1bQ8CFT2 1985 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Plcg1Q62077 1302 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Mocs3A2BDX3 460 aaKnown RBP10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Spata31E9QAF0 1014 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Morc3F7BJB9 942 aaKnown RBP10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Sema3fO88632 785 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Arhgap44Q5SSM3 814 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Arhgap15Q811M1 481 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Dpp9Q8BVG4 862 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Strip2Q8C9H6 844 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 AdigQ8R400 80 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Golph3Q9CRA5 298 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rhobtb3Q9CTN4 611 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Hic1Q9R1Y5 733 aa10.39□□□□□ -0.75
Syne1-201ENSMUST00000041639 Serpina16D3Z660 418 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Zfp850J3QPC5 689 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Cdca2Q14B71 982 aaKnown RBP10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tspyl5Q69ZB3 406 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Celf4Q7TSY6 486 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Snrnp27Q8K194 155 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 OafQ8QZR4 282 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rpf2Q9JJ80 306 aaKnown RBP10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Bub1bQ9Z1S0 1052 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gm3460E9QAI8 215 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Cyp19a1P28649 503 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Inpp1P49442 396 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 InscQ3HNM7 579 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Lilrb4Q64281 335 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Stxbp2Q64324 593 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Znrd1-asQ8R0E5 213 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 YwhabQ9CQV8 246 aaKnown RBP10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Thumpd2Q9CZB3 528 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Fmnl1Q9JL26 1094 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Klra17Q9JMA4 273 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 SmapQ9R0P4 181 aaKnown RBP10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Flt4P35917 1363 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 UrosP51163 265 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Spc25Q3UA16 226 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ip6k2Q80V72 448 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Sik2Q8CFH6 931 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gpsm2Q8VDU0 679 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Fuca2Q99KR8 461 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Olfr711Q9EPG2 314 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Vmn2r87E9PZX4 848 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Zfp212G3X8R7 492 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gm3424L7N298 263 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gm8246M0QWX9 263 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 SftpdP50404 374 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Meis3P97368 378 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ccdc127Q3TC33 260 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gsdmc4Q3TR54 480 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Arhgef16Q3U5C8 713 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Scnn1aQ61180 699 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tmem117Q8BH18 514 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Dcun1d2Q8BZJ7 259 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms