RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 NptxrQ99J85 493 aa20.39■□□□□ 0.86
Ccdc50-201ENSMUST00000039443 Myoz2Q9JJW5 264 aa20.39■□□□□ 0.86
Ccdc50-201ENSMUST00000039443 SufuQ9Z0P7 484 aa20.39■□□□□ 0.86
Ccdc50-201ENSMUST00000039443 Lactbl1S4R213 581 aa20.39■□□□□ 0.86
Ccdc50-201ENSMUST00000039443 Ccdc88cQ6VGS5 2009 aa20.39■□□□□ 0.86
Ccdc50-201ENSMUST00000039443 Nrxn2E9Q7X7 1710 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Zfp839E9PUU5 921 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Myo1eE9Q634 1107 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Usp35M0QWN7 1009 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Ctnnal1O88327 731 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Il13ra2O88786 383 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Csf1rP09581 977 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Map2k1P31938 393 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Cd68P31996 326 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Cdc25cP48967 447 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Lrch1P62046 709 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Chrna5Q2MKA5 467 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Jade3Q6IE82 823 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Rnaseh2aQ9CWY8 301 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 IqcdQ9D3V1 458 aa20.39■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 PorP37040 678 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Tmem120bQ3TA38 339 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 IgflQ6B9Z0 140 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Rassf6Q80UQ2 353 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Ccdc28bQ8CEG5 200 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Cep83Q9D5R3 692 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Pard6bQ9JK83 371 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Mtmr2Q9Z2D1 643 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Cntnap2Q9CPW0 1332 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Gm45837F7D3W5 961 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Xrcc5P27641 732 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Cops2P61202 443 aaKnown RBP20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Ppp3caP63328 521 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 EnahQ03173 802 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Gspt2Q149F3 632 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Dlg4Q62108 724 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Ntrk3Q6VNS1 825 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Raver2Q7TPD6 673 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Bank1Q80VH0 783 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Trim65Q8BFW4 522 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Rusc1Q8BG26 893 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Rapgef5Q8C0Q9 814 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Rtp1Q8C8C1 263 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Tti1Q91V83 1085 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 NcaldQ91X97 193 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Mfsd5Q921Y4 450 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Pde2aQ922S4 916 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Tgm5Q9D7I9 724 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Klrc2Q9WTJ9 238 aa20.38■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Atp2c2A7L9Z8 944 aa20.37■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 4933406M09RikG3XA12 479 aa20.37■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Atp2a2O55143 1044 aaKnown RBP20.37■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Snx3O70492 162 aa20.37■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Got1P05201 413 aa20.37■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Mier3Q3UHF3 551 aa20.37■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Tmc8Q7TN58 722 aa20.37■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Slc7a6osQ7TPE5 306 aa20.37■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Bcas3Q8CCN5 928 aa20.37■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Hdac9Q99N13 588 aa20.37■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Ccdc124Q9D8X2 217 aaKnown RBP20.37■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Unc13dB2RUP2 1085 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Sar1aP36536 198 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Siah1bQ06985 282 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Ncf1Q09014 390 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 CcnjlQ5SRT8 387 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 FancbQ5XJY6 703 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Ano5Q75UR0 904 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Tmco6Q8BQX5 494 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 FktnQ8R507 461 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Apbb1ipQ8R5A3 670 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Pcdhb3Q91XZ7 784 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Lman1Q9D0F3 517 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Gtf2ird1Q9JI57 1104 aaKnown RBP20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Znf354bQ9QXT9 601 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Adam22Q9R1V6 904 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Znf394Q9Z1D9 521 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Gm45194A0A140LJG2 572 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 D830030K20RikE9PYQ5 218 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Gm3043K7N693 218 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Gm16440K7N6G6 218 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Gm2244L7N2A3 218 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Gm3278L7N2D2 218 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Gm8271L7N2E2 218 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Cyth3O08967 399 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Xbp1O35426 267 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Aff1O88573 1216 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Ephb2P54763 986 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Rit2P70425 217 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 OgdhQ60597 1023 aaKnown RBP20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 StilQ60988 1262 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Klhdc10Q6PAR0 439 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 B4galnt4Q766D5 1034 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Vgll2Q8BGW8 322 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Fbxo38Q8BMI0 1194 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Agap1Q8BXK8 857 aaKnown RBP20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Trim47Q8C0E3 641 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Vmn1r64Q8R2B8 320 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Bst2Q8R2Q8 172 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Armc9Q9D2I5 817 aa20.36■□□□□ 0.85
Ccdc50-201ENSMUST00000039443 Prl2b1Q9DAZ2 228 aa20.36■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms