RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Zfp120Q8BZW4 436 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Calhm4Q8CE93 315 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Mboat7Q8CHK3 473 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Spns2Q91VM4 549 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Nsmce1Q9D720 266 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Prl2b1Q9DAZ2 228 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Tlr5Q9JLF7 859 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Adam22Q9R1V6 904 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Usp17lbE9Q9U0 468 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Prl6a1O35257 230 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Mnat1P51949 309 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Gas7Q60780 421 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ggt6Q6PDE7 497 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ntrk3Q6VNS1 825 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Rhbdf2Q80WQ6 827 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Epc2Q8C0I4 808 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 MyripQ8K3I4 856 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Bzw1Q9CQC6 419 aaKnown RBP14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Fam205aA2APU8 1308 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Col5a2Q3U962 1497 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Scgb2b21A0A087WQA9 112 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Flvcr1B2RXV4 560 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 ArP19091 899 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Hoxa11P31311 313 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Mybl1P51960 751 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Uhmk1P97343 419 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 4930502E18RikQ14BQ3 236 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Zbtb17Q60821 794 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ksr1Q61097 873 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Klra3Q64329 266 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Zcchc2Q69ZB8 1166 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Tor4aQ8BH02 426 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Scfd1Q8BRF7 639 aaKnown RBP14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Pkn2Q8BWW9 983 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 CpzQ8R4V4 654 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Gm45194A0A140LJG2 572 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 FscbA1EGX6 1074 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Slc16a2O70324 545 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Krt19P19001 403 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Mmp14P53690 582 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Pih1d3Q3KNI6 218 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Mier3Q3UHF3 551 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Best3Q6H1V1 669 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Krt77Q6IFZ6 572 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Styk1Q6J9G1 429 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 SpidrQ8BGX7 933 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Taok3Q8BYC6 898 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Nemp2Q8CB65 421 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 D630039A03RikQ8K0M7 236 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Appl2Q8K3G9 662 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Dock2Q8C3J5 1828 aa14.37□□□□□ -0.11
Nup88-201ENSMUST00000035283 Rfx8D3YU81 596 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Flot1O08917 428 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Cyp11b1Q3TG86 501 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Frmd8Q3UFK8 466 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 R3hdm4Q4VBF2 262 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ppp2r5cQ60996 524 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 MogsQ80UM7 834 aaKnown RBP14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Tmem117Q8BH18 514 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Zfp449Q8CB76 518 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Commd10Q8JZY2 202 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Spire2Q8K1S6 718 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Zbtb44Q8R0A2 453 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Smchd1Q6P5D8 2007 aaKnown RBP14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Gm3182K7N6T8 263 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Usp35M0QWN7 1009 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Dnajb6O54946 365 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Xrcc5P27641 732 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Slc1a1P51906 523 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 GalcP54818 684 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Orc2Q60862 576 aaKnown RBP14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Kif5bQ61768 963 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 CrkQ64010 304 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Q6DFW0 481 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Klhdc10Q6PAR0 439 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 PhkbQ7TSH2 1085 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Man2a2Q8BRK9 1152 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Rsad2Q8CBB9 362 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Lrit1Q8K099 624 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Cpa5Q8R4H4 436 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Slc12a8Q8VI23 705 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 St5Q924W7 1134 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Sdr42e1Q9D665 394 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Cmtm5Q9D6G9 156 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Lypla2Q9WTL7 231 aa14.36□□□□□ -0.11
Nup88-201ENSMUST00000035283 Magea4F2Z493 315 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Akr1b7P21300 316 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Gucy2fQ5SDA5 1108 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Nell2Q61220 819 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Fmnl3Q6ZPF4 1028 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ints8Q80V86 995 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Q8BGN9 141 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Btbd6Q8K2J9 488 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Uroc1Q8VC12 676 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Havcr2Q8VIM0 281 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Q9DAQ4 598 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 AuhQ9JLZ3 314 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Mta2Q9R190 668 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Bub1bQ9Z1S0 1052 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Mtmr2Q9Z2D1 643 aa14.35□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 88.3 ms