RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Nkx2-5P42582 318 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Casp4P70343 373 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Znf12Q7TSI0 686 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Olfml3Q8BK62 406 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ndufb9Q9CQJ8 179 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ttc30a2A2AKQ8 664 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Msx3P70354 204 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Mkrn3Q60764 544 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Q6DFW0 481 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Nacc1Q7TSZ8 514 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ccdc90bQ8C3X2 256 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm36028A0A0U1RPM1 299 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ets2P15037 468 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Pola2P33611 600 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Syce2Q505B8 171 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Afap1l2Q5DTU0 825 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Runx1t1Q61909 577 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Irak4Q8R4K2 459 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Terb2Q9D494 218 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Rab11fip1Q9D620 645 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Trim75Q3UWZ0 467 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Islr2Q5RKR3 745 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Snx19Q6P4T1 997 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Znf879Q8BI99 563 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Fbxl5Q8C2S5 690 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ascc2Q91WR3 749 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Coa7Q921H9 231 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 1700016D06RikQ9DAA5 166 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Usp29Q9ES63 869 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Capn7Q9R1S8 813 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tjp2Q9Z0U1 1167 aaKnown RBP10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Zfp850J3QPC5 689 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm3424L7N298 263 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm8246M0QWX9 263 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Exoc7O35250 697 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Llgl2Q3TJ91 1027 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ip6k2Q80V72 448 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Mtss1Q8R1S4 759 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Add1Q9QYC0 735 aaKnown RBP10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 C130060K24RikG3UWA8 416 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Trappc3O55013 180 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Pgk2P09041 417 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Large2Q5XPT3 690 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Adck2Q6NSR3 617 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Afap1l1Q8BZI0 768 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Unc45bQ8CGY6 931 aaKnown RBP10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Kif19Q99PT9 997 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Hcn2O88703 863 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Pde6bP23440 856 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 ItkQ03526 625 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Kctd1Q5M956 257 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Klra5Q60652 266 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Usp49Q6P9L4 685 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Trim65Q8BFW4 522 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tnip2Q99JG7 430 aa10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Top3bQ9Z321 862 aaKnown RBP10.71□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Klc2O88448 599 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 M6prP24668 278 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 SnrpaQ62189 287 aaKnown RBP10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Deup1Q7M6Y5 601 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Cyfip1Q7TMB8 1253 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 R3hdm2Q80TM6 1044 aaKnown RBP10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Smap1Q91VZ6 440 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 CinpQ9D0V8 212 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Iqgap1Q9JKF1 1657 aaKnown RBP10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gbp11A9YVJ5 442 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Alppl2P24823 529 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 UrosP51163 265 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Meis3P97368 378 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ttc22Q8C159 568 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Zswim7Q9CWQ2 152 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Scgb2b20Q9JI02 112 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Atp6v0a1Q9Z1G4 839 aaKnown RBP10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Kank3Q9Z1P7 791 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 CatspereP0DP43 985 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ankrd27Q3UMR0 1048 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ankrd13aQ80UP5 588 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rnaseh2bQ80ZV0 308 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ap3m2Q8R2R9 418 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Nsmce3Q9CPR8 279 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 4930519G04RikQ9CPT7 205 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Eya4Q9Z191 616 aa10.71□□□□□ -0.7
Ubr1-201ENSMUST00000028728 TnrQ8BYI9 1358 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Cdhr2E9Q7P9 1308 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Armc3A2AU72 881 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Etnk2A7MCT6 385 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Slc4a9E9PUP3 929 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Zbtb11G5E8B9 1050 aaKnown RBP10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gcnt1Q09324 428 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gm3414Q3TNU4 584 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Usp13Q5BKP2 858 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Celf4Q7TSY6 486 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Slc44a2Q8BY89 706 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Bbs7Q8K2G4 715 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Grk2Q99MK8 689 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 TcimQ9D915 106 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Arhgef7Q9ES28 862 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 ChrngP04760 519 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Npas2P97460 816 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ces3aQ63880 571 aa10.7□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms