RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Ppp1r13lQ5I1X5 824 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Luc7l3Q5SUF2 432 aaKnown RBP10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Ksr1Q61097 873 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 C2cd5Q7TPS5 1016 aaKnown RBP10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Tmem39bQ810L4 492 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 DcakdQ8BHC4 231 aaKnown RBP10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Arhgap18Q8K0Q5 663 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 BlmhQ8R016 455 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Scrn2Q8VCA8 425 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Myh6Q02566 1938 aaKnown RBP10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Eps15P42567 897 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Pon1P52430 355 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Map3k7clP58500 142 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Cdca2Q14B71 982 aaKnown RBP10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 FaxcQ3UMF9 409 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Psen2Q61144 448 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Rnaseh2bQ80ZV0 308 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Dusp4Q8BFV3 398 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 PreplQ8C167 725 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 A430089I19RikQ8C9W1 407 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Eif2b5Q8CHW4 717 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Ppp1r16bQ8VHQ3 568 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Fkbp6Q91XW8 327 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 StambpQ9CQ26 424 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 IkbipQ9DBZ1 373 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Tlr5Q9JLF7 859 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Ank1Q02357 1862 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Sec14l1A8Y5H7 715 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Tnfrsf11aO35305 625 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Cbfa2t2O70374 594 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Vcam1P29533 739 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Col6a1Q04857 1025 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 FancbQ5XJY6 703 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 AlcamQ61490 583 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 OcrlQ6NVF0 900 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Xlr3bQ6P205 226 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 SnphQ80U23 495 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Slc4a7Q8BTY2 1034 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Scfd2Q8BTY8 684 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Fam20aQ8CID3 541 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Trpm8Q8R4D5 1104 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Tlr3Q99MB1 905 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 4930550L24RikQ99PA7 320 aa10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Rfwd2Q9R1A8 733 aaKnown RBP10.09□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Znf804aA2AKY4 1200 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Oip5A2AQ14 241 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 EnahQ03173 802 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Emc10Q3TAS6 258 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 KhsrpQ3U0V1 748 aaKnown RBP10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Fam92bQ3V2J0 292 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Srrm3Q80WV7 648 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Kat14Q8CID0 779 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Trim68Q8K243 485 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Spats2lQ91WJ7 558 aaKnown RBP10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Thumpd2Q9CZB3 528 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Chordc1Q9D1P4 331 aaKnown RBP10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Mrpl2Q9D773 306 aaKnown RBP10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Rexo2Q9D8S4 237 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Pard6bQ9JK83 371 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Rabgef1Q9JM13 491 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 EvplQ9D952 2035 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Vmn2r77L7N2B7 854 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Aff1O88573 1216 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 AfmO89020 608 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Epha3P29319 983 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Psmc5P62196 406 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 SpoplQ2M2N2 392 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Q32P12 615 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Fbxw10Q5SUS0 1030 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Klra6Q60653 266 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Rimbp2Q80U40 1072 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Heatr3Q8BQM4 679 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 NkrfQ8BY02 690 aaKnown RBP10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Gpsm2Q8VDU0 679 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Cttnbp2nlQ99LJ0 638 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Lztr1Q9CQ33 837 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Klrc1Q9Z202 244 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Diaph3Q9Z207 1171 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Wdr72D3YYM4 1114 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Chil3O35744 398 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Trappc3O55013 180 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Sept7O55131 436 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 CnpP16330 420 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Hmgb2P30681 210 aaKnown RBP10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 RalaP63321 206 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Ppp3caP63328 521 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Ect2Q07139 913 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Syne3Q4FZC9 975 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Ifnl2Q4VK74 193 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Ano5Q75UR0 904 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Efl1Q8C0D5 1127 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Pomgnt1Q91X88 660 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 NptxrQ99J85 493 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Snf8Q9CZ28 258 aa10.08□□□□□ -0.8
Col6a1-201ENSMUST00000001147 GabreA2AMW3 916 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 HpdP49429 393 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 GmncQ3URY2 333 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Dsg1aQ61495 1057 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Nlrp14Q6B966 993 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Tmc3Q7TQ69 1130 aa10.07□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms