RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE4	YNR060W	HIS2	P38635	335 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	FAA2	P39518	744 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	SOP4	P39543	234 aa	Predicted RBP	3.11	□□□□□ -1.91
FRE4	YNR060W	CCC1	P47818	322 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	TAF6	P53040	516 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	LST7	P53237	242 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	RSM27	P53305	110 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	MKC7	P53379	596 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	OST6	Q03723	332 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	GAT3	Q07928	141 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	GET4	Q12125	312 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	YDL009C	Q12210	107 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	SIA1	Q12212	622 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	YOP1	Q12402	180 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	DET1	Q99288	334 aa	Known RBP	3.11	□□□□□ -1.91
FRE4	YNR060W	AI5_BETA	Q9ZZX0	354 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	HPR1	P17629	752 aa	Known RBP	3.11	□□□□□ -1.91
FRE4	YNR060W	MET16	P18408	261 aa	Predicted RBP	3.11	□□□□□ -1.91
FRE4	YNR060W	YCR022C	P25620	114 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	TIP1	P27654	210 aa	Predicted RBP	3.11	□□□□□ -1.91
FRE4	YNR060W	VMA5	P31412	392 aa	Known RBP	3.11	□□□□□ -1.91
FRE4	YNR060W	SPT14	P32363	452 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	PHA2	P32452	334 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	GCG1	P32656	232 aa	Known RBP	3.11	□□□□□ -1.91
FRE4	YNR060W	SPO23	P33757	523 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	TAF14	P35189	244 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	MCR1	P36060	302 aa	Known RBP	3.11	□□□□□ -1.91
FRE4	YNR060W	VRG4	P40107	337 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	GTT1	P40582	234 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	NSA1	P53136	463 aa	Predicted RBP	3.11	□□□□□ -1.91
FRE4	YNR060W	MAL13	P53338	473 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	RSC9	Q03124	581 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	THI7	Q05998	598 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	MRPL51	Q06090	140 aa	Predicted RBP	3.11	□□□□□ -1.91
FRE4	YNR060W	YOR029W	Q12243	111 aa		3.11	□□□□□ -1.91
FRE4	YNR060W	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.11	□□□□□ -1.91
FRE4	YNR060W	SAL1	D6W196	494 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	TDH2	P00358	332 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	RAD7	P06779	565 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	COS2	P0CX12	379 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	COS3	P0CX13	379 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	RPL4A	P10664	362 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	FBA1	P14540	359 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	ARF2	P19146	181 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	CMK2	P22517	447 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	RNA15	P25299	296 aa	Predicted RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	MKK1	P32490	508 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	COX13	P32799	129 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	JEN1	P36035	616 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	UTP30	P36144	274 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	YBR056W	P38081	501 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	MAL32	P38158	584 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	AIM18	P38884	321 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	GWT1	P47026	490 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	RPC17	P47076	161 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	VPS25	P47142	202 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	YPT11	P48559	417 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	RPL4B	P49626	362 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	UFD1	P53044	361 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	MAL12	P53341	584 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	ATP23	P53722	227 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	MTQ1	P53944	314 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	HXT11	P54862	567 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	DID2	P69771	204 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	IRC15	Q02733	499 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	CWC27	Q02770	301 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	ENT5	Q03769	411 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	CSM3	Q04659	317 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	SHS1	Q07657	551 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	SRO7	Q12038	1033 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	TPT1	Q12272	230 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	LYS2	P07702	1392 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	DNF2	Q12675	1612 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	SPT3	P06844	337 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	URA6	P15700	204 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	MIR1	P23641	311 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	YCP4	P25349	247 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	CAM1	P29547	415 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	YEF1	P32622	495 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	SIP2	P34164	415 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	PTC1	P35182	281 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	RRP3	P38712	501 aa	Known RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	IDP2	P41939	412 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	YGR210C	P42942	411 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	COS4	P43542	379 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	DIE2	P50076	525 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	NBP1	P52919	319 aa	Predicted RBP	3.1	□□□□□ -1.91
FRE4	YNR060W	YGL204C	P53089	101 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	YPL080C	Q02826	108 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	BET5	Q03630	159 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	TAF9	Q05027	157 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	ALE1	Q08548	619 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	Q0144	Q9ZZW2	109 aa		3.1	□□□□□ -1.91
FRE4	YNR060W	VMR1	P38735	1592 aa		3.09	□□□□□ -1.91
FRE4	YNR060W	IML1	P47170	1584 aa		3.09	□□□□□ -1.91
FRE4	YNR060W	RRP5	Q05022	1729 aa	Known RBP	3.09	□□□□□ -1.91
FRE4	YNR060W	DCC1	P25559	380 aa		3.09	□□□□□ -1.91
FRE4	YNR060W	MNS1	P32906	549 aa		3.09	□□□□□ -1.91
FRE4	YNR060W	AIM29	P36154	155 aa		3.09	□□□□□ -1.91
FRE4	YNR060W	NAT2	P37293	288 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms