RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W RIM15P43565 1770 aa1.66□□□□□ -2.14
PKR1YMR123W YPR117WQ06116 2489 aa1.65□□□□□ -2.14
PKR1YMR123W MIG1P27705 504 aa1.65□□□□□ -2.15
PKR1YMR123W ALP1P38971 573 aa1.65□□□□□ -2.15
PKR1YMR123W CAJ1P39101 391 aa1.65□□□□□ -2.15
PKR1YMR123W YFR045WP43617 309 aa1.65□□□□□ -2.15
PKR1YMR123W ACT1P60010 375 aaKnown RBP1.65□□□□□ -2.15
PKR1YMR123W STE23Q06010 1027 aa1.65□□□□□ -2.15
PKR1YMR123W RLP24Q07915 199 aaKnown RBP1.65□□□□□ -2.15
PKR1YMR123W MIM1Q08176 113 aa1.65□□□□□ -2.15
PKR1YMR123W RDL2Q08742 149 aaKnown RBP1.65□□□□□ -2.15
PKR1YMR123W TFC7Q12415 435 aa1.65□□□□□ -2.15
PKR1YMR123W TDH2P00358 332 aaKnown RBP1.64□□□□□ -2.15
PKR1YMR123W TDH3P00359 332 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
PKR1YMR123W MET2P08465 486 aa1.64□□□□□ -2.15
PKR1YMR123W YLL053CP0CD98 152 aa1.64□□□□□ -2.15
PKR1YMR123W TAL1P15019 335 aaKnown RBP1.64□□□□□ -2.15
PKR1YMR123W RBK1P25332 333 aa1.64□□□□□ -2.15
PKR1YMR123W CSE1P33307 960 aa1.64□□□□□ -2.15
PKR1YMR123W MYO3P36006 1272 aa1.64□□□□□ -2.15
PKR1YMR123W LIN1P38852 340 aaPredicted RBP1.64□□□□□ -2.15
PKR1YMR123W BTT1P40314 149 aaPredicted RBP1.64□□□□□ -2.15
PKR1YMR123W YDR114CQ04597 100 aa1.64□□□□□ -2.15
PKR1YMR123W DXO1Q06349 442 aa1.64□□□□□ -2.15
PKR1YMR123W YPL245WQ12179 454 aaKnown RBP1.64□□□□□ -2.15
PKR1YMR123W VPS13Q07878 3144 aa1.64□□□□□ -2.15
PKR1YMR123W TAO3P40468 2376 aa1.63□□□□□ -2.15
PKR1YMR123W MRPL20P22354 195 aaPredicted RBP1.63□□□□□ -2.15
PKR1YMR123W UIP5P36137 443 aa1.63□□□□□ -2.15
PKR1YMR123W PRP39P39682 629 aaKnown RBP1.63□□□□□ -2.15
PKR1YMR123W FYV8P46949 817 aaKnown RBP1.63□□□□□ -2.15
PKR1YMR123W PRO2P54885 456 aaKnown RBP1.63□□□□□ -2.15
PKR1YMR123W YLR012CQ07927 99 aa1.63□□□□□ -2.15
PKR1YMR123W ERP3Q12403 225 aa1.63□□□□□ -2.15
PKR1YMR123W SSK22P25390 1331 aaPredicted RBP1.63□□□□□ -2.15
PKR1YMR123W PMD1P32634 1753 aa1.62□□□□□ -2.15
PKR1YMR123W UTP10P42945 1769 aaKnown RBP1.62□□□□□ -2.15
PKR1YMR123W ACB1P31787 87 aa1.62□□□□□ -2.15
PKR1YMR123W MEI5P32489 222 aa1.62□□□□□ -2.15
PKR1YMR123W YKR032WP36127 104 aa1.62□□□□□ -2.15
PKR1YMR123W TAF6P53040 516 aa1.62□□□□□ -2.15
PKR1YMR123W PXR1P53335 271 aaPredicted RBP1.62□□□□□ -2.15
PKR1YMR123W YNL040WP53960 456 aaPredicted RBP1.62□□□□□ -2.15
PKR1YMR123W ABZ2Q03266 374 aa1.62□□□□□ -2.15
PKR1YMR123W UBX2Q04228 584 aa1.62□□□□□ -2.15
PKR1YMR123W IES3Q12345 250 aa1.62□□□□□ -2.15
PKR1YMR123W LYS2P07702 1392 aa1.61□□□□□ -2.15
PKR1YMR123W SPS100P13130 326 aa1.61□□□□□ -2.15
PKR1YMR123W KRE1P17260 313 aa1.61□□□□□ -2.15
PKR1YMR123W RSA4P25382 515 aaKnown RBP1.61□□□□□ -2.15
PKR1YMR123W VPH2P32341 215 aa1.61□□□□□ -2.15
PKR1YMR123W EDC2P40023 145 aaPredicted RBP1.61□□□□□ -2.15
PKR1YMR123W ECO1P43605 281 aa1.61□□□□□ -2.15
PKR1YMR123W UFD1P53044 361 aa1.61□□□□□ -2.15
PKR1YMR123W YGL114WP53134 725 aa1.61□□□□□ -2.15
PKR1YMR123W YNR066CP53752 436 aa1.61□□□□□ -2.15
PKR1YMR123W YNL146WP53906 100 aa1.61□□□□□ -2.15
PKR1YMR123W YPL080CQ02826 108 aa1.61□□□□□ -2.15
PKR1YMR123W MIX17Q03667 156 aa1.61□□□□□ -2.15
PKR1YMR123W CLP1Q08685 445 aaPredicted RBP1.61□□□□□ -2.15
PKR1YMR123W CBP2P03874 630 aaPredicted RBP1.6□□□□□ -2.15
PKR1YMR123W YKL162CP36052 402 aa1.6□□□□□ -2.15
PKR1YMR123W ATG12P38316 186 aa1.6□□□□□ -2.15
PKR1YMR123W PET8P38921 284 aa1.6□□□□□ -2.15
PKR1YMR123W AIM20P40451 204 aa1.6□□□□□ -2.15
PKR1YMR123W RVB1Q03940 463 aaKnown RBP1.6□□□□□ -2.15
PKR1YMR123W YMR111CQ04461 462 aaPredicted RBP1.6□□□□□ -2.15
PKR1YMR123W PEX30Q06169 523 aa1.6□□□□□ -2.15
PKR1YMR123W FEX1Q08913 375 aa1.6□□□□□ -2.15
PKR1YMR123W FEX2Q08991 375 aa1.6□□□□□ -2.15
PKR1YMR123W YDR262WQ12331 272 aa1.6□□□□□ -2.15
PKR1YMR123W MRX4Q12467 430 aa1.6□□□□□ -2.15
PKR1YMR123W TOR2P32600 2474 aaKnown RBP1.59□□□□□ -2.15
PKR1YMR123W YOL163WP0CF20 169 aa1.59□□□□□ -2.15
PKR1YMR123W GAL3P13045 520 aa1.59□□□□□ -2.15
PKR1YMR123W TRX1P22217 103 aaKnown RBP1.59□□□□□ -2.15
PKR1YMR123W PRE7P23724 241 aaKnown RBP1.59□□□□□ -2.15
PKR1YMR123W VMA5P31412 392 aaKnown RBP1.59□□□□□ -2.15
PKR1YMR123W SUR1P33300 382 aa1.59□□□□□ -2.15
PKR1YMR123W AIM29P36154 155 aa1.59□□□□□ -2.15
PKR1YMR123W YHL044WP38727 235 aa1.59□□□□□ -2.15
PKR1YMR123W SPL2P38839 148 aa1.59□□□□□ -2.15
PKR1YMR123W YFL040WP43562 540 aa1.59□□□□□ -2.15
PKR1YMR123W RGM1Q00453 211 aa1.59□□□□□ -2.15
PKR1YMR123W IRC4Q03036 179 aa1.59□□□□□ -2.15
PKR1YMR123W VIK1Q12045 647 aa1.59□□□□□ -2.15
PKR1YMR123W REX3Q12090 404 aa1.59□□□□□ -2.15
PKR1YMR123W FLO1P32768 1537 aa1.59□□□□□ -2.16
PKR1YMR123W SWI1P09547 1314 aa1.59□□□□□ -2.16
PKR1YMR123W TOR1P35169 2470 aa1.58□□□□□ -2.16
PKR1YMR123W RPL18AP0CX49 186 aaKnown RBP1.58□□□□□ -2.16
PKR1YMR123W RPL18BP0CX50 186 aaKnown RBP1.58□□□□□ -2.16
PKR1YMR123W CDC42P19073 191 aa1.58□□□□□ -2.16
PKR1YMR123W YPS1P32329 569 aa1.58□□□□□ -2.16
PKR1YMR123W YGP1P38616 354 aaKnown RBP1.58□□□□□ -2.16
PKR1YMR123W SOP4P39543 234 aaPredicted RBP1.58□□□□□ -2.16
PKR1YMR123W YER084WP40057 128 aa1.58□□□□□ -2.16
PKR1YMR123W RTR1P40084 226 aaPredicted RBP1.58□□□□□ -2.16
PKR1YMR123W OSW5P40219 148 aa1.58□□□□□ -2.16
PKR1YMR123W YNL050CP53952 270 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms