RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	PMT6	P42934	759 aa		13.68	□□□□□ -0.22
CCC1	YLR220W	BAG7	Q12128	409 aa		13.68	□□□□□ -0.22
CCC1	YLR220W	SEC16	P48415	2195 aa	Known RBP	13.68	□□□□□ -0.22
CCC1	YLR220W	CDC36	P06100	191 aa	Predicted RBP	13.67	□□□□□ -0.22
CCC1	YLR220W	COX9	P07255	59 aa		13.67	□□□□□ -0.22
CCC1	YLR220W	GIT1	P25346	518 aa		13.67	□□□□□ -0.22
CCC1	YLR220W	FUN26	P31381	517 aa		13.67	□□□□□ -0.22
CCC1	YLR220W	PPG1	P32838	368 aa		13.67	□□□□□ -0.22
CCC1	YLR220W	VPS17	P32913	551 aa		13.67	□□□□□ -0.22
CCC1	YLR220W	PAU24	P38155	120 aa		13.67	□□□□□ -0.22
CCC1	YLR220W	PTH1	P38876	190 aa	Known RBP	13.67	□□□□□ -0.22
CCC1	YLR220W	YJL218W	P40892	196 aa	Known RBP	13.67	□□□□□ -0.22
CCC1	YLR220W	YNL165W	P53891	406 aa		13.67	□□□□□ -0.22
CCC1	YLR220W	MDM36	Q06820	579 aa		13.67	□□□□□ -0.22
CCC1	YLR220W	SYC1	Q08553	188 aa	Predicted RBP	13.67	□□□□□ -0.22
CCC1	YLR220W	PRS5	Q12265	496 aa	Known RBP	13.67	□□□□□ -0.22
CCC1	YLR220W	COX17	Q12287	69 aa		13.67	□□□□□ -0.22
CCC1	YLR220W	SCEI	P03882	235 aa		13.66	□□□□□ -0.22
CCC1	YLR220W	EXG1	P23776	448 aa	Known RBP	13.66	□□□□□ -0.22
CCC1	YLR220W	DPB2	P24482	689 aa	Predicted RBP	13.66	□□□□□ -0.22
CCC1	YLR220W	AHC2	P25649	128 aa		13.66	□□□□□ -0.22
CCC1	YLR220W	GDS1	P41913	522 aa		13.66	□□□□□ -0.22
CCC1	YLR220W	RMD9	P53140	646 aa	Known RBP	13.66	□□□□□ -0.22
CCC1	YLR220W	MKC7	P53379	596 aa		13.66	□□□□□ -0.22
CCC1	YLR220W	SRL4	Q03085	281 aa		13.66	□□□□□ -0.22
CCC1	YLR220W	NNT1	Q05874	261 aa		13.66	□□□□□ -0.22
CCC1	YLR220W	RAF1	Q06891	181 aa		13.66	□□□□□ -0.22
CCC1	YLR220W	TY1A-NL1	Q12391	440 aa	Known RBP	13.66	□□□□□ -0.22
CCC1	YLR220W	YPR1	Q12458	312 aa		13.66	□□□□□ -0.22
CCC1	YLR220W	STE18	P18852	110 aa		13.65	□□□□□ -0.22
CCC1	YLR220W	DOA4	P32571	926 aa		13.65	□□□□□ -0.22
CCC1	YLR220W	SLZ1	P40167	298 aa		13.65	□□□□□ -0.22
CCC1	YLR220W	ALG12	P53730	551 aa		13.65	□□□□□ -0.22
CCC1	YLR220W	HLR1	Q04429	423 aa		13.65	□□□□□ -0.22
CCC1	YLR220W	MRX8	Q05473	314 aa		13.65	□□□□□ -0.22
CCC1	YLR220W	MCM21	Q06675	368 aa		13.65	□□□□□ -0.22
CCC1	YLR220W	YEL009C-A	A0A023PZF2	135 aa		13.64	□□□□□ -0.23
CCC1	YLR220W	PRB1	P09232	635 aa		13.64	□□□□□ -0.23
CCC1	YLR220W	MRP1	P10662	321 aa	Known RBP	13.64	□□□□□ -0.23
CCC1	YLR220W	UTP11	P34247	250 aa	Predicted RBP	13.64	□□□□□ -0.23
CCC1	YLR220W	DPB11	P47027	764 aa	Predicted RBP	13.64	□□□□□ -0.23
CCC1	YLR220W	PET191	Q02772	108 aa		13.64	□□□□□ -0.23
CCC1	YLR220W	YMR265C	Q03508	461 aa	Known RBP	13.64	□□□□□ -0.23
CCC1	YLR220W	YOR378W	Q08902	515 aa		13.64	□□□□□ -0.23
CCC1	YLR220W	QCR7	P00128	127 aa		13.63	□□□□□ -0.23
CCC1	YLR220W	RPS16A	P0CX51	143 aa	Known RBP	13.63	□□□□□ -0.23
CCC1	YLR220W	RPS16B	P0CX52	143 aa	Known RBP	13.63	□□□□□ -0.23
CCC1	YLR220W	RPL24B	P24000	155 aa	Known RBP	13.63	□□□□□ -0.23
CCC1	YLR220W	MEK1	P24719	497 aa	Predicted RBP	13.63	□□□□□ -0.23
CCC1	YLR220W	BOS1	P25385	244 aa		13.63	□□□□□ -0.23
CCC1	YLR220W	PEX32	P38292	413 aa		13.63	□□□□□ -0.23
CCC1	YLR220W	JLP2	P40206	208 aa		13.63	□□□□□ -0.23
CCC1	YLR220W	NIT3	P49954	291 aa		13.63	□□□□□ -0.23
CCC1	YLR220W	SCY1	P53009	804 aa		13.63	□□□□□ -0.23
CCC1	YLR220W	RSM28	Q03430	361 aa		13.63	□□□□□ -0.23
CCC1	YLR220W	YAP6	Q03935	383 aa		13.63	□□□□□ -0.23
CCC1	YLR220W	RTC5	Q12108	567 aa	Known RBP	13.63	□□□□□ -0.23
CCC1	YLR220W	REP1	P03871	373 aa		13.62	□□□□□ -0.23
CCC1	YLR220W	HEM4	P06174	275 aa		13.62	□□□□□ -0.23
CCC1	YLR220W	DBF2	P22204	572 aa		13.62	□□□□□ -0.23
CCC1	YLR220W	ATG15	P25641	520 aa		13.62	□□□□□ -0.23
CCC1	YLR220W	RPC34	P32910	317 aa		13.62	□□□□□ -0.23
CCC1	YLR220W	GPX2	P38143	162 aa		13.62	□□□□□ -0.23
CCC1	YLR220W	YGL204C	P53089	101 aa		13.62	□□□□□ -0.23
CCC1	YLR220W	IMO32	P53219	342 aa		13.62	□□□□□ -0.23
CCC1	YLR220W	MRP51	Q02950	344 aa		13.62	□□□□□ -0.23
CCC1	YLR220W	YMR252C	Q04814	134 aa		13.62	□□□□□ -0.23
CCC1	YLR220W	RBS1	Q05672	457 aa	Known RBP	13.62	□□□□□ -0.23
CCC1	YLR220W	TSR2	Q06672	205 aa	Known RBP	13.62	□□□□□ -0.23
CCC1	YLR220W	LUC7	Q07508	261 aa	Predicted RBP	13.62	□□□□□ -0.23
CCC1	YLR220W	RRI1	Q12468	440 aa		13.62	□□□□□ -0.23
CCC1	YLR220W	SIR2	P06700	562 aa		13.61	□□□□□ -0.23
CCC1	YLR220W	RSM22	P36056	628 aa		13.61	□□□□□ -0.23
CCC1	YLR220W	YBR096W	P38256	230 aa		13.61	□□□□□ -0.23
CCC1	YLR220W	YDR387C	Q04162	555 aa		13.61	□□□□□ -0.23
CCC1	YLR220W	YDR514C	Q04408	483 aa		13.61	□□□□□ -0.23
CCC1	YLR220W	FOL3	Q12676	427 aa	Predicted RBP	13.61	□□□□□ -0.23
CCC1	YLR220W	MAK32	P23060	363 aa		13.6	□□□□□ -0.23
CCC1	YLR220W	KRR1	P25586	316 aa	Predicted RBP	13.6	□□□□□ -0.23
CCC1	YLR220W	ITR1	P30605	584 aa		13.6	□□□□□ -0.23
CCC1	YLR220W	KRE6	P32486	720 aa		13.6	□□□□□ -0.23
CCC1	YLR220W	CCZ1	P38273	704 aa		13.6	□□□□□ -0.23
CCC1	YLR220W	SEN34	P39707	275 aa		13.6	□□□□□ -0.23
CCC1	YLR220W	GPP1	P41277	250 aa	Known RBP	13.6	□□□□□ -0.23
CCC1	YLR220W	PAM16	P42949	149 aa		13.6	□□□□□ -0.23
CCC1	YLR220W	PMT5	P52867	743 aa		13.6	□□□□□ -0.23
CCC1	YLR220W	CPR8	P53728	308 aa		13.6	□□□□□ -0.23
CCC1	YLR220W	SSY1	Q03770	852 aa		13.6	□□□□□ -0.23
CCC1	YLR220W	API2	Q04413	109 aa		13.6	□□□□□ -0.23
CCC1	YLR220W	MGR3	Q04472	501 aa		13.6	□□□□□ -0.23
CCC1	YLR220W	CRR1	Q05790	422 aa		13.6	□□□□□ -0.23
CCC1	YLR220W	CDC31	P06704	161 aa	Known RBP	13.59	□□□□□ -0.23
CCC1	YLR220W	SED4	P25365	1065 aa		13.59	□□□□□ -0.23
CCC1	YLR220W	ANR2	P36090	516 aa	Predicted RBP	13.59	□□□□□ -0.23
CCC1	YLR220W	PUG1	P40100	303 aa		13.59	□□□□□ -0.23
CCC1	YLR220W	SLS1	P42900	643 aa		13.59	□□□□□ -0.23
CCC1	YLR220W	YGR054W	P53235	642 aa	Known RBP	13.59	□□□□□ -0.23
CCC1	YLR220W	ELA1	P53861	379 aa	Predicted RBP	13.59	□□□□□ -0.23
CCC1	YLR220W	ASI3	P53983	676 aa		13.59	□□□□□ -0.23
CCC1	YLR220W	PAU2	P32612	120 aa		13.58	□□□□□ -0.24

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms