RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W PGC1Q08959 321 aa1.7□□□□□ -2.14
VMA21YGR105W RRP42Q12277 265 aaPredicted RBP1.7□□□□□ -2.14
VMA21YGR105W YPR064WQ12492 139 aa1.7□□□□□ -2.14
VMA21YGR105W PAN1P32521 1480 aa1.69□□□□□ -2.14
VMA21YGR105W CAR2P07991 424 aaKnown RBP1.69□□□□□ -2.14
VMA21YGR105W MSS116P15424 664 aaKnown RBP1.69□□□□□ -2.14
VMA21YGR105W AEP1P32493 518 aa1.69□□□□□ -2.14
VMA21YGR105W SWD2P36104 329 aaPredicted RBP1.69□□□□□ -2.14
VMA21YGR105W ABZ2Q03266 374 aa1.69□□□□□ -2.14
VMA21YGR105W VPS20Q04272 221 aa1.69□□□□□ -2.14
VMA21YGR105W YLR297WQ05899 129 aa1.69□□□□□ -2.14
VMA21YGR105W OSM1P21375 501 aaKnown RBP1.68□□□□□ -2.14
VMA21YGR105W RRT12P25381 491 aa1.68□□□□□ -2.14
VMA21YGR105W CLB6P32943 380 aa1.68□□□□□ -2.14
VMA21YGR105W COY1P34237 679 aa1.68□□□□□ -2.14
VMA21YGR105W SPL2P38839 148 aa1.68□□□□□ -2.14
VMA21YGR105W SUR2P38992 349 aa1.68□□□□□ -2.14
VMA21YGR105W CAJ1P39101 391 aa1.68□□□□□ -2.14
VMA21YGR105W SEN34P39707 275 aa1.68□□□□□ -2.14
VMA21YGR105W SSO2P39926 295 aa1.68□□□□□ -2.14
VMA21YGR105W OST3P48439 350 aa1.68□□□□□ -2.14
VMA21YGR105W RIB4P50861 169 aaPredicted RBP1.68□□□□□ -2.14
VMA21YGR105W DBP6P53734 629 aaKnown RBP1.68□□□□□ -2.14
VMA21YGR105W DPP1Q05521 289 aa1.68□□□□□ -2.14
VMA21YGR105W YLL007CQ07799 665 aa1.68□□□□□ -2.14
VMA21YGR105W VPS68Q12016 184 aa1.68□□□□□ -2.14
VMA21YGR105W COT1P32798 439 aa1.67□□□□□ -2.14
VMA21YGR105W YJR146WP47174 117 aa1.67□□□□□ -2.14
VMA21YGR105W YPT32P51996 222 aaKnown RBP1.67□□□□□ -2.14
VMA21YGR105W FCF1Q05498 189 aaPredicted RBP1.67□□□□□ -2.14
VMA21YGR105W CTS2Q06350 511 aa1.67□□□□□ -2.14
VMA21YGR105W YOR114WQ12219 294 aa1.67□□□□□ -2.14
VMA21YGR105W AGC1Q12482 902 aa1.67□□□□□ -2.14
VMA21YGR105W PET18P25362 215 aa1.66□□□□□ -2.14
VMA21YGR105W YKL063CP35725 167 aa1.66□□□□□ -2.14
VMA21YGR105W SHQ1P40486 507 aaPredicted RBP1.66□□□□□ -2.14
VMA21YGR105W RPE1P46969 238 aa1.66□□□□□ -2.14
VMA21YGR105W COX16P47081 118 aa1.66□□□□□ -2.14
VMA21YGR105W YJR141WP47172 347 aaPredicted RBP1.66□□□□□ -2.14
VMA21YGR105W PRO2P54885 456 aaKnown RBP1.66□□□□□ -2.14
VMA21YGR105W YMR166CQ03829 368 aa1.66□□□□□ -2.14
VMA21YGR105W SUE1Q06524 206 aa1.66□□□□□ -2.14
VMA21YGR105W NUP157P40064 1391 aaKnown RBP1.65□□□□□ -2.15
VMA21YGR105W TRX1P22217 103 aaKnown RBP1.65□□□□□ -2.15
VMA21YGR105W ATG15P25641 520 aa1.65□□□□□ -2.15
VMA21YGR105W RPL5P26321 297 aaKnown RBP1.65□□□□□ -2.15
VMA21YGR105W RPS0AP32905 252 aaKnown RBP1.65□□□□□ -2.15
VMA21YGR105W SPT4P32914 102 aaPredicted RBP1.65□□□□□ -2.15
VMA21YGR105W RPC37P36121 282 aa1.65□□□□□ -2.15
VMA21YGR105W POP8P38208 133 aa1.65□□□□□ -2.15
VMA21YGR105W PHO89P38361 574 aa1.65□□□□□ -2.15
VMA21YGR105W MPP10P47083 593 aaKnown RBP1.65□□□□□ -2.15
VMA21YGR105W NBP1P52919 319 aaPredicted RBP1.65□□□□□ -2.15
VMA21YGR105W YML018CQ03730 393 aa1.65□□□□□ -2.15
VMA21YGR105W GRH1Q04410 372 aaKnown RBP1.65□□□□□ -2.15
VMA21YGR105W ASR1Q06834 288 aa1.65□□□□□ -2.15
VMA21YGR105W YOR283WQ12040 230 aaKnown RBP1.65□□□□□ -2.15
VMA21YGR105W SIA1Q12212 622 aa1.65□□□□□ -2.15
VMA21YGR105W RPL26AP05743 127 aaKnown RBP1.64□□□□□ -2.15
VMA21YGR105W TFS1P14306 219 aa1.64□□□□□ -2.15
VMA21YGR105W CDC40P40968 455 aaPredicted RBP1.64□□□□□ -2.15
VMA21YGR105W DAN1P47178 298 aa1.64□□□□□ -2.15
VMA21YGR105W RPL26BP53221 127 aaKnown RBP1.64□□□□□ -2.15
VMA21YGR105W YPL039WQ03080 316 aa1.64□□□□□ -2.15
VMA21YGR105W YMR209CQ03648 457 aa1.64□□□□□ -2.15
VMA21YGR105W CGI121Q03705 181 aaKnown RBP1.64□□□□□ -2.15
VMA21YGR105W YPL150WQ12152 901 aa1.64□□□□□ -2.15
VMA21YGR105W DPM1P14020 267 aaKnown RBP1.63□□□□□ -2.15
VMA21YGR105W VMA2P16140 517 aaKnown RBP1.63□□□□□ -2.15
VMA21YGR105W KRE6P32486 720 aa1.63□□□□□ -2.15
VMA21YGR105W CAT2P32796 670 aaKnown RBP1.63□□□□□ -2.15
VMA21YGR105W YPL077CQ02831 240 aa1.63□□□□□ -2.15
VMA21YGR105W CUR1Q06469 252 aa1.63□□□□□ -2.15
VMA21YGR105W YOL019WQ08157 551 aa1.63□□□□□ -2.15
VMA21YGR105W YBL112CQ3E7Y4 105 aa1.63□□□□□ -2.15
VMA21YGR105W TPM1P17536 199 aaKnown RBP1.62□□□□□ -2.15
VMA21YGR105W ERG2P32352 222 aa1.62□□□□□ -2.15
VMA21YGR105W SUA5P32579 426 aa1.62□□□□□ -2.15
VMA21YGR105W COG7P53195 279 aa1.62□□□□□ -2.15
VMA21YGR105W VOA1P53262 265 aa1.62□□□□□ -2.15
VMA21YGR105W MYO5Q04439 1219 aaKnown RBP1.62□□□□□ -2.15
VMA21YGR105W YOR268CQ08734 132 aa1.62□□□□□ -2.15
VMA21YGR105W POM33Q12164 279 aa1.62□□□□□ -2.15
VMA21YGR105W TY3A-GQ12173 290 aa1.62□□□□□ -2.15
VMA21YGR105W TY3A-IQ99219 290 aa1.62□□□□□ -2.15
VMA21YGR105W ATP6P00854 259 aa1.61□□□□□ -2.15
VMA21YGR105W RAD10P06838 210 aa1.61□□□□□ -2.15
VMA21YGR105W PET494P07390 489 aaPredicted RBP1.61□□□□□ -2.15
VMA21YGR105W SAR1P20606 190 aaKnown RBP1.61□□□□□ -2.15
VMA21YGR105W TOM40P23644 387 aaKnown RBP1.61□□□□□ -2.15
VMA21YGR105W YIA6P40556 373 aa1.61□□□□□ -2.15
VMA21YGR105W LOH1P47055 219 aa1.61□□□□□ -2.15
VMA21YGR105W GTO1P48239 356 aa1.61□□□□□ -2.15
VMA21YGR105W FMP41P53889 259 aaKnown RBP1.61□□□□□ -2.15
VMA21YGR105W SLM2P53955 656 aa1.61□□□□□ -2.15
VMA21YGR105W MGR3Q04472 501 aa1.61□□□□□ -2.15
VMA21YGR105W TAF9Q05027 157 aa1.61□□□□□ -2.15
VMA21YGR105W SPO77Q06134 477 aa1.61□□□□□ -2.15
VMA21YGR105W VAC14Q06708 880 aa1.61□□□□□ -2.15
VMA21YGR105W ISD11Q6Q560 94 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms