RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeast

Gene UBC6, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC6	YER100W	MHR1	Q06630	226 aa		4.25	□□□□□ -1.73
UBC6	YER100W	NDD1	Q08887	554 aa		4.25	□□□□□ -1.73
UBC6	YER100W	TFC7	Q12415	435 aa		4.25	□□□□□ -1.73
UBC6	YER100W	FOL3	Q12676	427 aa	Predicted RBP	4.25	□□□□□ -1.73
UBC6	YER100W	SEY1	Q99287	776 aa		4.25	□□□□□ -1.73
UBC6	YER100W	YAL064W-B	O13512	126 aa		4.24	□□□□□ -1.73
UBC6	YER100W	RPS3	P05750	240 aa	Known RBP	4.24	□□□□□ -1.73
UBC6	YER100W	PET494	P07390	489 aa	Predicted RBP	4.24	□□□□□ -1.73
UBC6	YER100W	MRPL20	P22354	195 aa	Predicted RBP	4.24	□□□□□ -1.73
UBC6	YER100W	AAT2	P23542	418 aa	Known RBP	4.24	□□□□□ -1.73
UBC6	YER100W	PEX3	P28795	441 aa		4.24	□□□□□ -1.73
UBC6	YER100W	HOM6	P31116	359 aa	Known RBP	4.24	□□□□□ -1.73
UBC6	YER100W	ASF2	P32448	525 aa	Predicted RBP	4.24	□□□□□ -1.73
UBC6	YER100W	VPS21	P36017	210 aa	Known RBP	4.24	□□□□□ -1.73
UBC6	YER100W	RFS1	P38234	210 aa	Known RBP	4.24	□□□□□ -1.73
UBC6	YER100W	RAD17	P48581	401 aa		4.24	□□□□□ -1.73
UBC6	YER100W	SDS23	P53172	527 aa		4.24	□□□□□ -1.73
UBC6	YER100W	YNR066C	P53752	436 aa		4.24	□□□□□ -1.73
UBC6	YER100W	BOR1	P53838	576 aa		4.24	□□□□□ -1.73
UBC6	YER100W	ADD37	Q03233	198 aa		4.24	□□□□□ -1.73
UBC6	YER100W	TIP41	Q12199	356 aa		4.24	□□□□□ -1.73
UBC6	YER100W	THP2	O13539	261 aa	Known RBP	4.23	□□□□□ -1.73
UBC6	YER100W	FUS3	P16892	353 aa	Known RBP	4.23	□□□□□ -1.73
UBC6	YER100W	DAL81	P21657	970 aa		4.23	□□□□□ -1.73
UBC6	YER100W	MGM101	P32787	269 aa	Known RBP	4.23	□□□□□ -1.73
UBC6	YER100W	ALK2	P32789	676 aa	Predicted RBP	4.23	□□□□□ -1.73
UBC6	YER100W	OXA1	P39952	402 aa		4.23	□□□□□ -1.73
UBC6	YER100W	SMB1	P40018	196 aa	Known RBP	4.23	□□□□□ -1.73
UBC6	YER100W	PEX31	P53203	462 aa		4.23	□□□□□ -1.73
UBC6	YER100W	SWS2	P53937	143 aa		4.23	□□□□□ -1.73
UBC6	YER100W	TPS1	Q00764	495 aa	Known RBP	4.23	□□□□□ -1.73
UBC6	YER100W	YET2	Q04210	160 aa		4.23	□□□□□ -1.73
UBC6	YER100W	DCR2	Q05924	578 aa		4.23	□□□□□ -1.73
UBC6	YER100W	YLR177W	Q06251	628 aa		4.23	□□□□□ -1.73
UBC6	YER100W	MIM1	Q08176	113 aa		4.23	□□□□□ -1.73
UBC6	YER100W	VIK1	Q12045	647 aa		4.23	□□□□□ -1.73
UBC6	YER100W	GET4	Q12125	312 aa		4.23	□□□□□ -1.73
UBC6	YER100W	NAM9	P27929	486 aa		4.22	□□□□□ -1.73
UBC6	YER100W	QRI5	P32344	111 aa		4.22	□□□□□ -1.73
UBC6	YER100W	FMP46	P36141	133 aa	Known RBP	4.22	□□□□□ -1.73
UBC6	YER100W	SHE3	P38272	425 aa	Known RBP	4.22	□□□□□ -1.73
UBC6	YER100W	OM14	P38325	134 aa		4.22	□□□□□ -1.73
UBC6	YER100W	RTC3	P38804	111 aa	Predicted RBP	4.22	□□□□□ -1.73
UBC6	YER100W	HSH155	P49955	971 aa	Known RBP	4.22	□□□□□ -1.73
UBC6	YER100W	NBP1	P52919	319 aa	Predicted RBP	4.22	□□□□□ -1.73
UBC6	YER100W	CUS2	P53830	285 aa	Predicted RBP	4.22	□□□□□ -1.73
UBC6	YER100W	SNZ1	Q03148	297 aa		4.22	□□□□□ -1.73
UBC6	YER100W	YMR226C	Q05016	267 aa	Known RBP	4.22	□□□□□ -1.73
UBC6	YER100W	STH1	P32597	1359 aa		4.22	□□□□□ -1.73
UBC6	YER100W	TPI1	P00942	248 aa	Known RBP	4.21	□□□□□ -1.74
UBC6	YER100W	CDC33	P07260	213 aa	Known RBP	4.21	□□□□□ -1.74
UBC6	YER100W	CMK2	P22517	447 aa		4.21	□□□□□ -1.74
UBC6	YER100W	CDC50	P25656	391 aa		4.21	□□□□□ -1.74
UBC6	YER100W	VPH2	P32341	215 aa		4.21	□□□□□ -1.74
UBC6	YER100W	GPX1	P36014	167 aa		4.21	□□□□□ -1.74
UBC6	YER100W	RIB1	P38066	345 aa		4.21	□□□□□ -1.74
UBC6	YER100W	BMT2	P38278	337 aa		4.21	□□□□□ -1.74
UBC6	YER100W	BAT1	P38891	393 aa	Known RBP	4.21	□□□□□ -1.74
UBC6	YER100W	COX15	P40086	486 aa		4.21	□□□□□ -1.74
UBC6	YER100W	YRB2	P40517	327 aa		4.21	□□□□□ -1.74
UBC6	YER100W	JHD2	P47156	728 aa	Predicted RBP	4.21	□□□□□ -1.74
UBC6	YER100W	NBP35	P52920	328 aa		4.21	□□□□□ -1.74
UBC6	YER100W	YPS5	P53057	165 aa		4.21	□□□□□ -1.74
UBC6	YER100W	VPS60	Q03390	229 aa		4.21	□□□□□ -1.74
UBC6	YER100W	SEC13	Q04491	297 aa	Known RBP	4.21	□□□□□ -1.74
UBC6	YER100W	YCT1	Q12235	531 aa		4.21	□□□□□ -1.74
UBC6	YER100W	TCP1	P12612	559 aa	Known RBP	4.2	□□□□□ -1.74
UBC6	YER100W	STE18	P18852	110 aa		4.2	□□□□□ -1.74
UBC6	YER100W	YPK2	P18961	677 aa		4.2	□□□□□ -1.74
UBC6	YER100W	PRP18	P33411	251 aa	Predicted RBP	4.2	□□□□□ -1.74
UBC6	YER100W	SOL2	P37262	315 aa		4.2	□□□□□ -1.74
UBC6	YER100W	MBA1	P38300	278 aa		4.2	□□□□□ -1.74
UBC6	YER100W	ATG12	P38316	186 aa		4.2	□□□□□ -1.74
UBC6	YER100W	URA8	P38627	578 aa	Predicted RBP	4.2	□□□□□ -1.74
UBC6	YER100W	KRE9	P39005	276 aa		4.2	□□□□□ -1.74
UBC6	YER100W	RFC4	P40339	323 aa	Known RBP	4.2	□□□□□ -1.74
UBC6	YER100W	SER33	P40510	469 aa		4.2	□□□□□ -1.74
UBC6	YER100W	YJR079W	P47126	109 aa		4.2	□□□□□ -1.74
UBC6	YER100W	USE1	P53146	245 aa		4.2	□□□□□ -1.74
UBC6	YER100W	NRM1	P53718	249 aa		4.2	□□□□□ -1.74
UBC6	YER100W	RNH201	P53942	307 aa		4.2	□□□□□ -1.74
UBC6	YER100W	EBS1	Q03466	884 aa	Known RBP	4.2	□□□□□ -1.74
UBC6	YER100W	YOR292C	Q08743	309 aa		4.2	□□□□□ -1.74
UBC6	YER100W	YMR230W-A	Q3E7B5	62 aa		4.2	□□□□□ -1.74
UBC6	YER100W	YBR121C-A	P0C5L4	52 aa		4.19	□□□□□ -1.74
UBC6	YER100W	TIM17	P39515	158 aa		4.19	□□□□□ -1.74
UBC6	YER100W	VEL1	P53058	206 aa		4.19	□□□□□ -1.74
UBC6	YER100W	COG7	P53195	279 aa		4.19	□□□□□ -1.74
UBC6	YER100W	YNL095C	P53932	642 aa		4.19	□□□□□ -1.74
UBC6	YER100W	ASI3	P53983	676 aa		4.19	□□□□□ -1.74
UBC6	YER100W	PHO2	P07269	559 aa		4.18	□□□□□ -1.74
UBC6	YER100W	BGL2	P15703	313 aa	Known RBP	4.18	□□□□□ -1.74
UBC6	YER100W	YMR31	P19955	123 aa		4.18	□□□□□ -1.74
UBC6	YER100W	YCR102C	P25608	368 aa		4.18	□□□□□ -1.74
UBC6	YER100W	CDC13	P32797	924 aa	Known RBP	4.18	□□□□□ -1.74
UBC6	YER100W	YKL075C	P36083	450 aa		4.18	□□□□□ -1.74
UBC6	YER100W	YBR241C	P38142	488 aa		4.18	□□□□□ -1.74
UBC6	YER100W	YBR062C	P38239	180 aa		4.18	□□□□□ -1.74
UBC6	YER100W	MIC12	P38341	106 aa		4.18	□□□□□ -1.74
UBC6	YER100W	MIG3	P39943	394 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms