RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 NOP9Q86U38 636 aaKnown RBP14.9□□□□□ -0.02
PHGDH-233ENST00000642021 ATXN2LQ8WWM7 1075 aaKnown RBP14.9□□□□□ -0.02
PHGDH-233ENST00000642021 CCT6BQ92526 530 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 ELMO3Q96BJ8 720 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 PGM2Q96G03 612 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 POP1Q99575 1024 aaKnown RBP14.9□□□□□ -0.02
PHGDH-233ENST00000642021 SELENOSQ9BQE4 189 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 JPH2Q9BR39 696 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-233ENST00000642021 FAM129AQ9BZQ8 928 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 CNOT10Q9H9A5 744 aaKnown RBP14.9□□□□□ -0.02
PHGDH-233ENST00000642021 PTPN22Q9Y2R2 807 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 ITGB5P18084 799 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 CHRNA3P32297 505 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 PLCB4Q15147 1175 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 ZYXQ15942 572 aaKnown RBP14.89□□□□□ -0.03
PHGDH-233ENST00000642021 TRMT1LQ7Z2T5 733 aaKnown RBP14.89□□□□□ -0.03
PHGDH-233ENST00000642021 HOOK3Q86VS8 718 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 EPS8L3Q8TE67 593 aaKnown RBP14.89□□□□□ -0.03
PHGDH-233ENST00000642021 KCND2Q9NZV8 630 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 PCYOX1Q9UHG3 505 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 SERPINA10Q9UK55 444 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 TMEM150BA6NC51 233 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 MMEP08473 750 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 SCTRP47872 440 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 SLC27A3Q5K4L6 730 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 SLC47A2Q86VL8 602 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 UBL4BQ8N7F7 174 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 EPS8L1Q8TE68 723 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 CD101Q93033 1021 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 CENPTQ96BT3 561 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 FBXO28Q9NVF7 368 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 HAUS2Q9NVX0 235 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 TRPC6Q9Y210 931 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 SPATA31A6Q5VVP1 1343 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 SYNGAP1Q96PV0 1343 aa14.89□□□□□ -0.03
PHGDH-233ENST00000642021 SRCAPQ6ZRS2 3230 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 SCN9AQ15858 1988 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 MIF4GDA9UHW6 222 aaKnown RBP14.88□□□□□ -0.03
PHGDH-233ENST00000642021 CYP26A1O43174 497 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 TRIM37O94972 964 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 INTS8Q75QN2 995 aaKnown RBP14.88□□□□□ -0.03
PHGDH-233ENST00000642021 FUKQ8N0W3 1084 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 KREMEN1Q96MU8 473 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 TEKT3Q9BXF9 490 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 WDR11Q9BZH6 1224 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 TMEM117Q9H0C3 514 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.88□□□□□ -0.032e-7■■■■□ 19.6
PHGDH-233ENST00000642021 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.88□□□□□ -0.03
PHGDH-233ENST00000642021 NOCTQ9UK39 431 aaKnown RBP14.88□□□□□ -0.03
PHGDH-233ENST00000642021 ATRNL1Q5VV63 1379 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 GOLGA8IPA6NC78 632 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 GOLGA8JA6NMD2 632 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 CCDC169A6NNP5 214 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 RTN2O75298 545 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 RARAP10276 462 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 ALAS1P13196 640 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 SIX1Q15475 284 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-233ENST00000642021 MASTLQ96GX5 879 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 TMX4Q9H1E5 349 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-233ENST00000642021 ACTR5Q9H9F9 607 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-233ENST00000642021 RASAL2Q9UJF2 1139 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 DBR1Q9UK59 544 aaKnown RBP14.88□□□□□ -0.03
PHGDH-233ENST00000642021 TMX2Q9Y320 296 aa14.88□□□□□ -0.03
PHGDH-233ENST00000642021 IRF6O14896 467 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 RGS16O15492 202 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-233ENST00000642021 ONECUT3O60422 494 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-233ENST00000642021 MUTP22033 750 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 RFX1P22670 979 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 TCEAL1Q15170 157 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 FMNL3Q8IVF7 1028 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 SEMA4DQ92854 862 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 ZKSCAN4Q969J2 545 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-233ENST00000642021 RPS6KC1Q96S38 1066 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 RANBP17Q9H2T7 1088 aaKnown RBP14.87□□□□□ -0.03
PHGDH-233ENST00000642021 HSPBP1Q9NZL4 362 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 ZHX2Q9Y6X8 837 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 TCP10L2B9ZVM9 353 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 COILP38432 576 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-233ENST00000642021 MYBPC2Q14324 1141 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 CCDC38Q502W7 563 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 LACTB2Q53H82 288 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-233ENST00000642021 ARMC9Q7Z3E5 817 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 FAM228AQ86W67 206 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 COL23A1Q86Y22 540 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-233ENST00000642021 SLC13A5Q86YT5 568 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-233ENST00000642021 CCDC105Q8IYK2 499 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 LRRC34Q8IZ02 419 aa14.87□□□□□ -0.03
PHGDH-233ENST00000642021 PRMT1Q99873 361 aaKnown RBP14.87□□□□□ -0.03
PHGDH-233ENST00000642021 PFASO15067 1338 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 PODXLO00592 558 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 TP73O15350 636 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 RIPK2O43353 540 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 ENTPD3O75355 529 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 FMO1Q01740 532 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 CYB5D1Q6P9G0 228 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 NSMFQ6X4W1 530 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 FAM71AQ8IYT1 594 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 PPM1KQ8N3J5 372 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 IL31RAQ8NI17 732 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 HVCN1Q96D96 273 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms