RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 FANCGO15287 622 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 EXTL3O43909 919 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 LDHAP00338 332 aaKnown RBP17.85■□□□□ 0.45
PHGDH-216ENST00000641375 GTF2H1P32780 548 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 PRKCIP41743 596 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 GCLMP48507 274 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 ARID5AQ03989 594 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 MAP2K5Q13163 448 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 C1orf220Q5T0J3 134 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 GJC2Q5T442 439 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-216ENST00000641375 IRF2BP2Q7Z5L9 587 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 AFG1LQ8WV93 481 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 VTI1AQ96AJ9 217 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 C2orf40Q9H1Z8 148 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 ZNF215Q9UL58 517 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-216ENST00000641375 URI1O94763 535 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-216ENST00000641375 ABL1P00519 1130 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 ANXA13P27216 316 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 STAT1P42224 750 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 CYP24A1Q07973 514 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 LAMTOR4Q0VGL1 99 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 SREBF2Q12772 1141 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 DRP2Q13474 957 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 EPC2Q52LR7 807 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 CDCA2Q69YH5 1023 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-216ENST00000641375 ZBTB8OSQ8IWT0 167 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 LMO3Q8TAP4 145 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 PLEKHO2Q8TD55 490 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 CCDC102AQ96A19 550 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 DNAJC12Q9UKB3 198 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 TLL2Q9Y6L7 1015 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 DOCK3Q8IZD9 2030 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 ASAP2O43150 1006 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 CTIFO43310 598 aaKnown RBP17.84■□□□□ 0.45
PHGDH-216ENST00000641375 CCDC172P0C7W6 258 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 FERP16591 822 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 MKRN4PQ13434 485 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-216ENST00000641375 TFDP1Q14186 410 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 SLC18A3Q16572 532 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 KRT39Q6A163 491 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 C17orf99Q6UX52 265 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 ZPBP2Q6X784 338 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 CCDC127Q96BQ5 260 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 FAM213AQ9BRX8 229 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 TMEM117Q9H0C3 514 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 RNPEPQ9H4A4 650 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 ZFYVE28Q9HCC9 887 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 TMEM8AQ9HCN3 771 aa17.84■□□□□ 0.45
PHGDH-216ENST00000641375 SUCLA2Q9P2R7 463 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-216ENST00000641375 AGO2Q9UKV8 859 aaKnown RBP17.84■□□□□ 0.45
PHGDH-216ENST00000641375 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.83■□□□□ 0.45
PHGDH-216ENST00000641375 CTAGE9A4FU28 777 aa17.83■□□□□ 0.45
PHGDH-216ENST00000641375 SLU7O95391 586 aaKnown RBP17.83■□□□□ 0.45
PHGDH-216ENST00000641375 HOXC6P09630 235 aa17.83■□□□□ 0.45
PHGDH-216ENST00000641375 SMPD1P17405 629 aa17.83■□□□□ 0.45
PHGDH-216ENST00000641375 GFPT1Q06210 699 aaPredicted RBP17.83■□□□□ 0.45
PHGDH-216ENST00000641375 LRRC71Q8N4P6 559 aa17.83■□□□□ 0.45
PHGDH-216ENST00000641375 USP20Q9Y2K6 914 aa17.83■□□□□ 0.45
PHGDH-216ENST00000641375 COL1A2P08123 1366 aa17.83■□□□□ 0.44
PHGDH-216ENST00000641375 LRRIQ3A6PVS8 624 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-216ENST00000641375 F8VZ95 297 aa17.83■□□□□ 0.44
PHGDH-216ENST00000641375 MAGEB2O15479 319 aa17.83■□□□□ 0.44
PHGDH-216ENST00000641375 MAGEA1P43355 309 aa17.83■□□□□ 0.44
PHGDH-216ENST00000641375 EFCAB12Q6NXP0 572 aa17.83■□□□□ 0.44
PHGDH-216ENST00000641375 GJB7Q6PEY0 223 aa17.83■□□□□ 0.44
PHGDH-216ENST00000641375 VPS36Q86VN1 386 aa17.83■□□□□ 0.44
PHGDH-216ENST00000641375 SLC35F6Q8N357 371 aa17.83■□□□□ 0.44
PHGDH-216ENST00000641375 RNF149Q8NC42 400 aa17.83■□□□□ 0.44
PHGDH-216ENST00000641375 LACRTQ9GZZ8 138 aa17.83■□□□□ 0.44
PHGDH-216ENST00000641375 EVPLQ92817 2033 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 SRGAP2CP0DJJ0 459 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 HOXD8P13378 290 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-216ENST00000641375 INSRRP14616 1297 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 SOX5P35711 763 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 PTK2Q05397 1052 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 TUBB2AQ13885 445 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 DRAP1Q14919 205 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-216ENST00000641375 MAPK6Q16659 721 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 C10orf76Q5T2E6 689 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 RHPN2Q8IUC4 686 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 GPIHBP1Q8IV16 184 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 OR6J1Q8NGC5 347 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.82■□□□□ 0.44
PHGDH-216ENST00000641375 TUBB2BQ9BVA1 445 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 TARS2Q9BW92 718 aaKnown RBP17.82■□□□□ 0.44
PHGDH-216ENST00000641375 MRPL4Q9BYD3 311 aaKnown RBP17.82■□□□□ 0.44
PHGDH-216ENST00000641375 CCDC113Q9H0I3 377 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 TRIM10Q9UDY6 481 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 AJAP1Q9UKB5 411 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-216ENST00000641375 COQ4Q9Y3A0 265 aa17.82■□□□□ 0.44
PHGDH-216ENST00000641375 RCCD1A6NED2 376 aa17.81■□□□□ 0.44
PHGDH-216ENST00000641375 PJA2O43164 708 aa17.81■□□□□ 0.44
PHGDH-216ENST00000641375 MATR3P43243 847 aaKnown RBP eCLIP17.81■□□□□ 0.44
PHGDH-216ENST00000641375 TNFAIP2Q03169 654 aa17.81■□□□□ 0.44
PHGDH-216ENST00000641375 DGKDQ16760 1214 aa17.81■□□□□ 0.44
PHGDH-216ENST00000641375 PHLDB3Q6NSJ2 640 aa17.81■□□□□ 0.44
PHGDH-216ENST00000641375 METTL13Q8N6R0 699 aa17.81■□□□□ 0.44
PHGDH-216ENST00000641375 TRAPPC12Q8WVT3 735 aa17.81■□□□□ 0.44
PHGDH-216ENST00000641375 NAPGQ99747 312 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-216ENST00000641375 C16orf70Q9BSU1 422 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms