RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 LTA4HP09960 611 aaKnown RBP6.78□□□□□ -1.32
CCDC7-216ENST00000640058 MASP1P48740 699 aa6.78□□□□□ -1.32
CCDC7-216ENST00000640058 SESN3P58005 492 aa6.78□□□□□ -1.32
CCDC7-216ENST00000640058 CCT2P78371 535 aaKnown RBP6.78□□□□□ -1.32
CCDC7-216ENST00000640058 ABHD15Q6UXT9 468 aa6.78□□□□□ -1.32
CCDC7-216ENST00000640058 XYLT1Q86Y38 959 aa6.78□□□□□ -1.32
CCDC7-216ENST00000640058 CMIPQ8IY22 773 aa6.78□□□□□ -1.32
CCDC7-216ENST00000640058 TGFBRAP1Q8WUH2 860 aa6.78□□□□□ -1.32
CCDC7-216ENST00000640058 TRIM8Q9BZR9 551 aa6.78□□□□□ -1.32
CCDC7-216ENST00000640058 SORCS3Q9UPU3 1222 aa6.78□□□□□ -1.32
CCDC7-216ENST00000640058 MAKP20794 623 aa6.77□□□□□ -1.33
CCDC7-216ENST00000640058 GZMKP49863 264 aa6.77□□□□□ -1.33
CCDC7-216ENST00000640058 TMPRSS15P98073 1019 aa6.77□□□□□ -1.33
CCDC7-216ENST00000640058 CDK17Q00537 523 aa6.77□□□□□ -1.33
CCDC7-216ENST00000640058 MRPL49Q13405 166 aaKnown RBP6.77□□□□□ -1.33
CCDC7-216ENST00000640058 RABL3Q5HYI8 236 aa6.77□□□□□ -1.33
CCDC7-216ENST00000640058 GLB1L3Q8NCI6 653 aaPredicted RBP6.77□□□□□ -1.33
CCDC7-216ENST00000640058 RSAD2Q8WXG1 361 aa6.77□□□□□ -1.33
CCDC7-216ENST00000640058 LSM14BQ9BX40 385 aaKnown RBP6.77□□□□□ -1.33
CCDC7-216ENST00000640058 CPEB1Q9BZB8 566 aaKnown RBP6.77□□□□□ -1.33
CCDC7-216ENST00000640058 NRDE2Q9H7Z3 1164 aa6.77□□□□□ -1.33
CCDC7-216ENST00000640058 VTA1Q9NP79 307 aa6.77□□□□□ -1.33
CCDC7-216ENST00000640058 DPP7Q9UHL4 492 aa6.77□□□□□ -1.33
CCDC7-216ENST00000640058 HDAC5Q9UQL6 1122 aa6.77□□□□□ -1.33
CCDC7-216ENST00000640058 DNAJC6O75061 913 aa6.76□□□□□ -1.33
CCDC7-216ENST00000640058 CNGA1P29973 690 aa6.76□□□□□ -1.33
CCDC7-216ENST00000640058 PTTG1IPP53801 180 aa6.76□□□□□ -1.33
CCDC7-216ENST00000640058 FSCN1Q16658 493 aaKnown RBP6.76□□□□□ -1.33
CCDC7-216ENST00000640058 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.76□□□□□ -1.33
CCDC7-216ENST00000640058 LARP4BQ92615 738 aaKnown RBP6.76□□□□□ -1.33
CCDC7-216ENST00000640058 QRSL1Q9H0R6 528 aaKnown RBP6.76□□□□□ -1.33
CCDC7-216ENST00000640058 ZMYM3Q14202 1370 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 GOLGA8AA7E2F4 631 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 GYPEP15421 78 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 ENPP1P22413 925 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 WNT3AP56704 352 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 APBA1Q02410 837 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 STAT4Q14765 748 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 DCAF17Q5H9S7 520 aaPredicted RBP6.75□□□□□ -1.33
CCDC7-216ENST00000640058 IQSEC1Q6DN90 963 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 LHFPL2Q6ZUX7 228 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 HTR3DQ70Z44 454 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 FAM83AQ86UY5 434 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 AFAP1L2Q8N4X5 818 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 MDM1Q8TC05 714 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 CPT1CQ8TCG5 803 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 ACAP3Q96P50 834 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 CDC5LQ99459 802 aaKnown RBP6.75□□□□□ -1.33
CCDC7-216ENST00000640058 GPRC5BQ9NZH0 403 aa6.75□□□□□ -1.33
CCDC7-216ENST00000640058 ITGA10O75578 1167 aa6.74□□□□□ -1.33
CCDC7-216ENST00000640058 SCAF4O95104 1147 aaKnown RBP6.74□□□□□ -1.33
CCDC7-216ENST00000640058 CTSSP25774 331 aa6.74□□□□□ -1.33
CCDC7-216ENST00000640058 SCAND1P57086 179 aa6.74□□□□□ -1.33
CCDC7-216ENST00000640058 TGFB2P61812 414 aa6.74□□□□□ -1.33
CCDC7-216ENST00000640058 ZNF627Q7L945 461 aa6.74□□□□□ -1.33
CCDC7-216ENST00000640058 ZNF276Q8N554 614 aa6.74□□□□□ -1.33
CCDC7-216ENST00000640058 SLC25A43Q8WUT9 341 aaPredicted RBP6.74□□□□□ -1.33
CCDC7-216ENST00000640058 SNX33Q8WV41 574 aa6.74□□□□□ -1.33
CCDC7-216ENST00000640058 SPON1Q9HCB6 807 aa6.74□□□□□ -1.33
CCDC7-216ENST00000640058 TRPS1Q9UHF7 1281 aa6.74□□□□□ -1.33
CCDC7-216ENST00000640058 EIF2B4Q9UI10 523 aaKnown RBP6.74□□□□□ -1.33
CCDC7-216ENST00000640058 GRXCR1A8MXD5 290 aa6.73□□□□□ -1.33
CCDC7-216ENST00000640058 ADCY6O43306 1168 aa6.73□□□□□ -1.33
CCDC7-216ENST00000640058 CLSTN1O94985 981 aa6.73□□□□□ -1.33
CCDC7-216ENST00000640058 ANKS6Q68DC2 871 aa6.73□□□□□ -1.33
CCDC7-216ENST00000640058 NAIF1Q69YI7 327 aaPredicted RBP6.73□□□□□ -1.33
CCDC7-216ENST00000640058 LILRA3Q8N6C8 439 aaPredicted RBP6.73□□□□□ -1.33
CCDC7-216ENST00000640058 OR52N2Q8NGI0 321 aa6.73□□□□□ -1.33
CCDC7-216ENST00000640058 FAM193BQ96PV7 902 aaPredicted RBP6.73□□□□□ -1.33
CCDC7-216ENST00000640058 GPRC5DQ9NZD1 345 aa6.73□□□□□ -1.33
CCDC7-216ENST00000640058 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.73□□□□□ -1.33
CCDC7-216ENST00000640058 PRR5-ARHGAP8B1AHC4 643 aa6.72□□□□□ -1.33
CCDC7-216ENST00000640058 SUV39H1O43463 412 aa6.72□□□□□ -1.33
CCDC7-216ENST00000640058 BRINP1O60477 761 aa6.72□□□□□ -1.33
CCDC7-216ENST00000640058 PEX11BO96011 259 aa6.72□□□□□ -1.33
CCDC7-216ENST00000640058 HSP90B1P14625 803 aaKnown RBP6.72□□□□□ -1.33
CCDC7-216ENST00000640058 ADSLP30566 484 aaPredicted RBP6.72□□□□□ -1.33
CCDC7-216ENST00000640058 APOBEC3AP31941 199 aaPredicted RBP6.72□□□□□ -1.33
CCDC7-216ENST00000640058 MEF2AQ02078 507 aaPredicted RBP6.72□□□□□ -1.33
CCDC7-216ENST00000640058 VPS72Q15906 364 aa6.72□□□□□ -1.33
CCDC7-216ENST00000640058 FBXO18Q8NFZ0 1043 aa6.72□□□□□ -1.33
CCDC7-216ENST00000640058 CHFRQ96EP1 664 aa6.72□□□□□ -1.33
CCDC7-216ENST00000640058 RAX2Q96IS3 184 aa6.72□□□□□ -1.33
CCDC7-216ENST00000640058 FAM126AQ9BYI3 521 aaPredicted RBP6.72□□□□□ -1.33
CCDC7-216ENST00000640058 ZNF768Q9H5H4 540 aaKnown RBP6.72□□□□□ -1.33
CCDC7-216ENST00000640058 C14orf119Q9NWQ9 140 aa6.72□□□□□ -1.33
CCDC7-216ENST00000640058 NR4A1P22736 598 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 PTGS2P35354 604 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 C19orf54Q5BKX5 351 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 TOR2AQ5JU69 321 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 PRAMEF14Q5SWL7 426 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 DOK3Q7L591 496 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 RNF169Q8NCN4 708 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 REPS2Q8NFH8 660 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 COG1Q8WTW3 980 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 TSPEARQ8WU66 669 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 ZNF480Q8WV37 535 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 LMBR1Q8WVP7 490 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 AUTS2Q8WXX7 1259 aa6.71□□□□□ -1.34
CCDC7-216ENST00000640058 HAS1Q92839 578 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms