RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 WRNIP1Q96S55 665 aa7.02□□□□□ -1.29
ATM-229ENST00000639953 STRBPQ96SI9 672 aaKnown RBP7.02□□□□□ -1.29
ATM-229ENST00000639953 AGXT2Q9BYV1 514 aa7.02□□□□□ -1.29
ATM-229ENST00000639953 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.02□□□□□ -1.29
ATM-229ENST00000639953 IMPACTQ9P2X3 320 aa7.02□□□□□ -1.29
ATM-229ENST00000639953 ATRNL1Q5VV63 1379 aa7.02□□□□□ -1.29
ATM-229ENST00000639953 GPAA1O43292 621 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 STX6O43752 255 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 FOXD2O60548 495 aaPredicted RBP7.01□□□□□ -1.29
ATM-229ENST00000639953 PFKFB2O60825 505 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 GSTM1P09488 218 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 MSL3P1P0C860 447 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 NCLP19338 710 aaKnown RBP7.01□□□□□ -1.29
ATM-229ENST00000639953 ECE1P42892 770 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 CCT2P78371 535 aaKnown RBP7.01□□□□□ -1.29
ATM-229ENST00000639953 KIF23Q02241 960 aaPredicted RBP7.01□□□□□ -1.29
ATM-229ENST00000639953 MVKQ03426 396 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 RESTQ13127 1097 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 LAPTM5Q13571 262 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 VGLL4Q14135 290 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 UBE3CQ15386 1083 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 SHROOM1Q2M3G4 852 aaPredicted RBP7.01□□□□□ -1.29
ATM-229ENST00000639953 KLHL40Q2TBA0 621 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 ZSCAN23Q3MJ62 389 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 DCAF15Q66K64 600 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 TMC6Q7Z403 805 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 FAM129CQ86XR2 697 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 IGDCC3Q8IVU1 814 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 TMEM151BQ8IW70 566 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 JMYQ8N9B5 988 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 NSUN7Q8NE18 718 aaKnown RBP7.01□□□□□ -1.29
ATM-229ENST00000639953 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.01□□□□□ -1.29
ATM-229ENST00000639953 SMARCC2Q8TAQ2 1214 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 APPBP2Q92624 585 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 ZSCAN31Q96LW9 406 aaPredicted RBP7.01□□□□□ -1.29
ATM-229ENST00000639953 SLC12A9Q9BXP2 914 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 ZNF341Q9BYN7 854 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 RRAGDQ9NQL2 400 aaPredicted RBP7.01□□□□□ -1.29
ATM-229ENST00000639953 FAM86C1Q9NVL1 165 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.01□□□□□ -1.29
ATM-229ENST00000639953 SMC3Q9UQE7 1217 aa7.01□□□□□ -1.29
ATM-229ENST00000639953 DDX49Q9Y6V7 483 aaKnown RBP7.01□□□□□ -1.29
ATM-229ENST00000639953 DOCK1Q14185 1865 aa7□□□□□ -1.29
ATM-229ENST00000639953 PHIPQ8WWQ0 1821 aa7□□□□□ -1.29
ATM-229ENST00000639953 CYP2D7A0A087X1C5 515 aa7□□□□□ -1.29
ATM-229ENST00000639953 OTOL1A6NHN0 477 aaPredicted RBP7□□□□□ -1.29
ATM-229ENST00000639953 GSG1L2A8MUP6 293 aa7□□□□□ -1.29
ATM-229ENST00000639953 ABLIM1O14639 778 aa7□□□□□ -1.29
ATM-229ENST00000639953 IGSF3O75054 1194 aa7□□□□□ -1.29
ATM-229ENST00000639953 TP53P04637 393 aaPredicted RBP7□□□□□ -1.29
ATM-229ENST00000639953 HSPA1AP0DMV8 641 aaKnown RBP7□□□□□ -1.29
ATM-229ENST00000639953 HSPA1BP0DMV9 641 aaKnown RBP7□□□□□ -1.29
ATM-229ENST00000639953 CYP2D6P10635 497 aa7□□□□□ -1.29
ATM-229ENST00000639953 PDIA3P30101 505 aaKnown RBP7□□□□□ -1.29
ATM-229ENST00000639953 ARL4AP40617 200 aa7□□□□□ -1.29
ATM-229ENST00000639953 RRP1BQ14684 758 aaKnown RBP7□□□□□ -1.29
ATM-229ENST00000639953 AXDND1Q5T1B0 1012 aaPredicted RBP7□□□□□ -1.29
ATM-229ENST00000639953 ZSCAN25Q6NSZ9 544 aa7□□□□□ -1.29
ATM-229ENST00000639953 CNKSR3Q6P9H4 555 aa7□□□□□ -1.29
ATM-229ENST00000639953 RUFY4Q6ZNE9 571 aa7□□□□□ -1.29
ATM-229ENST00000639953 PPFIBP1Q86W92 1011 aa7□□□□□ -1.29
ATM-229ENST00000639953 ANKRD13AQ8IZ07 590 aa7□□□□□ -1.29
ATM-229ENST00000639953 GTF3C6Q969F1 213 aa7□□□□□ -1.29
ATM-229ENST00000639953 OPTNQ96CV9 577 aa7□□□□□ -1.29
ATM-229ENST00000639953 WNK4Q96J92 1243 aa7□□□□□ -1.29
ATM-229ENST00000639953 PGBD1Q96JS3 809 aa7□□□□□ -1.29
ATM-229ENST00000639953 DHRS1Q96LJ7 313 aa7□□□□□ -1.29
ATM-229ENST00000639953 AIFM3Q96NN9 605 aa7□□□□□ -1.29
ATM-229ENST00000639953 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
ATM-229ENST00000639953 CRNKL1Q9BZJ0 848 aaKnown RBP7□□□□□ -1.29
ATM-229ENST00000639953 FTOQ9C0B1 505 aaKnown RBP eCLIP7□□□□□ -1.29
ATM-229ENST00000639953 XYLT2Q9H1B5 865 aa7□□□□□ -1.29
ATM-229ENST00000639953 DNAJC18Q9H819 358 aa7□□□□□ -1.29
ATM-229ENST00000639953 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7□□□□□ -1.29
ATM-229ENST00000639953 GRPEL1Q9HAV7 217 aa7□□□□□ -1.29
ATM-229ENST00000639953 LAMB1P07942 1786 aa7□□□□□ -1.29
ATM-229ENST00000639953 NEDD4P46934 1319 aa7□□□□□ -1.29
ATM-229ENST00000639953 COL2A1P02458 1487 aaPredicted RBP6.99□□□□□ -1.29
ATM-229ENST00000639953 GOLGA6L3A6NEY3 463 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 H0Y8X5 98 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 FOXN1O15353 648 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 AP5Z1O43299 807 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 GSNP06396 782 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 ZKSCAN1P17029 563 aaPredicted RBP6.99□□□□□ -1.29
ATM-229ENST00000639953 PSMA5P28066 241 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 PLCD1P51178 756 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 ZNF445P59923 1031 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 GUCY1B3Q02153 619 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 NOGQ13253 232 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 ZYXQ15942 572 aaKnown RBP6.99□□□□□ -1.29
ATM-229ENST00000639953 ZNF394Q53GI3 561 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 RPTNQ6XPR3 784 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 ZDHHC14Q8IZN3 488 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 FEZF2Q8TBJ5 459 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 HOOK2Q96ED9 719 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 DYNLL2Q96FJ2 89 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 TNFRSF12AQ9NP84 129 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 MCM9Q9NXL9 1143 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 ZNF112Q9UJU3 913 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 PCDHGB7Q9Y5F8 929 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms