RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 FAM193BQ96PV7 902 aaPredicted RBP19.55■□□□□ 0.72
PTPN11-207ENST00000639857 TCF25Q9BQ70 676 aa19.55■□□□□ 0.72
PTPN11-207ENST00000639857 ENTPD7Q9NQZ7 604 aa19.55■□□□□ 0.72
PTPN11-207ENST00000639857 KCNG1Q9UIX4 513 aa19.55■□□□□ 0.72
PTPN11-207ENST00000639857 GTF3C3Q9Y5Q9 886 aa19.55■□□□□ 0.72
PTPN11-207ENST00000639857 ARL5CA6NH57 179 aa19.54■□□□□ 0.72
PTPN11-207ENST00000639857 H3BQ06 376 aaPredicted RBP19.54■□□□□ 0.72
PTPN11-207ENST00000639857 CSPG5O95196 566 aa19.54■□□□□ 0.72
PTPN11-207ENST00000639857 PRKCBP05771 671 aa19.54■□□□□ 0.72
PTPN11-207ENST00000639857 GALTP07902 379 aa19.54■□□□□ 0.72
PTPN11-207ENST00000639857 SRGAP2BP0DMP2 458 aa19.54■□□□□ 0.72
PTPN11-207ENST00000639857 LONP1P36776 959 aaKnown RBP19.54■□□□□ 0.72
PTPN11-207ENST00000639857 NRIP1P48552 1158 aa19.54■□□□□ 0.72
PTPN11-207ENST00000639857 PRPF4BQ13523 1007 aaKnown RBP19.54■□□□□ 0.72
PTPN11-207ENST00000639857 GIT2Q14161 759 aa19.54■□□□□ 0.72
PTPN11-207ENST00000639857 SMC1AQ14683 1233 aaKnown RBP19.54■□□□□ 0.72
PTPN11-207ENST00000639857 TMEM119Q4V9L6 283 aa19.54■□□□□ 0.72
PTPN11-207ENST00000639857 RINT1Q6NUQ1 792 aa19.54■□□□□ 0.72
PTPN11-207ENST00000639857 EP400NLQ6ZTU2 488 aa19.54■□□□□ 0.72
PTPN11-207ENST00000639857 C1orf186Q6ZWK4 172 aa19.54■□□□□ 0.72
PTPN11-207ENST00000639857 DDX53Q86TM3 631 aaKnown RBP19.54■□□□□ 0.72
PTPN11-207ENST00000639857 IGSF21Q96ID5 467 aa19.54■□□□□ 0.72
PTPN11-207ENST00000639857 GTF2F1P35269 517 aaKnown RBP eCLIP19.53■□□□□ 0.72
PTPN11-207ENST00000639857 NDUFV1P49821 464 aa19.53■□□□□ 0.72
PTPN11-207ENST00000639857 DMP1Q13316 513 aaPredicted RBP19.53■□□□□ 0.72
PTPN11-207ENST00000639857 SMAD4Q13485 552 aaKnown RBP19.53■□□□□ 0.72
PTPN11-207ENST00000639857 SF3A1Q15459 793 aaKnown RBP19.53■□□□□ 0.72
PTPN11-207ENST00000639857 KCNK18Q7Z418 384 aa19.53■□□□□ 0.72
PTPN11-207ENST00000639857 APBB1IPQ7Z5R6 666 aaPredicted RBP19.53■□□□□ 0.72
PTPN11-207ENST00000639857 CABP7Q86V35 215 aa19.53■□□□□ 0.72
PTPN11-207ENST00000639857 SYT2Q8N9I0 419 aaPredicted RBP19.53■□□□□ 0.72
PTPN11-207ENST00000639857 PNMA5Q96PV4 448 aa19.53■□□□□ 0.72
PTPN11-207ENST00000639857 ADPGKQ9BRR6 497 aa19.53■□□□□ 0.72
PTPN11-207ENST00000639857 NXF3Q9H4D5 531 aaKnown RBP19.53■□□□□ 0.72
PTPN11-207ENST00000639857 IGFLR1Q9H665 355 aa19.53■□□□□ 0.72
PTPN11-207ENST00000639857 PRKAG3Q9UGI9 489 aa19.53■□□□□ 0.72
PTPN11-207ENST00000639857 IRAK3Q9Y616 596 aa19.53■□□□□ 0.72
PTPN11-207ENST00000639857 MORC2Q9Y6X9 1032 aaPredicted RBP19.53■□□□□ 0.72
PTPN11-207ENST00000639857 HIP1RO75146 1068 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 NPTXRO95502 500 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 PDIA4P13667 645 aaKnown RBP19.52■□□□□ 0.72
PTPN11-207ENST00000639857 MLH1P40692 756 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 UBA7P41226 1012 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 SLC11A1P49279 550 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 DSC1Q08554 894 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 COASYQ13057 564 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 DCAF4L1Q3SXM0 396 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 PLPP4Q5VZY2 271 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 TMEM184AQ6ZMB5 413 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 TMC7Q7Z402 723 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 ZNF280BQ86YH2 543 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 DAW1Q8N136 415 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 MRPL43Q8N983 215 aaKnown RBP19.52■□□□□ 0.72
PTPN11-207ENST00000639857 CALML4Q96GE6 196 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 MSLNLQ96KJ4 702 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 GAD1Q99259 594 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 RUSC1Q9BVN2 902 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 ZBP1Q9H171 429 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 PDZD7Q9H5P4 517 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 TMEM134Q9H6X4 195 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 DNAJB4Q9UDY4 337 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 CD207Q9UJ71 328 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 RBM19Q9Y4C8 960 aaKnown RBP19.52■□□□□ 0.72
PTPN11-207ENST00000639857 HES2Q9Y543 173 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 PCDHGC5Q9Y5F6 944 aa19.52■□□□□ 0.72
PTPN11-207ENST00000639857 NT5C1B-RDH14C9J2C7 533 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 LINC01565O15544 149 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 DDHD2O94830 711 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 GLP2RO95838 553 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 ALDH2P05091 517 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 IL9P15248 144 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 SLC12A3P55017 1021 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 DLX2Q07687 328 aaPredicted RBP19.51■□□□□ 0.71
PTPN11-207ENST00000639857 GRIK3Q13003 919 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 RESTQ13127 1097 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 MAPK7Q13164 816 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 KCNC3Q14003 757 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 TMEM132AQ24JP5 1023 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 RBM23Q86U06 439 aaKnown RBP19.51■□□□□ 0.71
PTPN11-207ENST00000639857 TMEM173Q86WV6 379 aaPredicted RBP19.51■□□□□ 0.71
PTPN11-207ENST00000639857 FAM178BQ8IXR5 827 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 SMRP1Q8NCR6 262 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 NECAB3Q96P71 396 aaPredicted RBP19.51■□□□□ 0.71
PTPN11-207ENST00000639857 GBP3Q9H0R5 595 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 RNF39Q9H2S5 420 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 ZSCAN16Q9H4T2 348 aaPredicted RBP19.51■□□□□ 0.71
PTPN11-207ENST00000639857 ARHGAP28Q9P2N2 729 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 BDP1A6H8Y1 2624 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 CITO14578 2027 aa19.51■□□□□ 0.71
PTPN11-207ENST00000639857 TRIP11Q15643 1979 aa19.5■□□□□ 0.71
PTPN11-207ENST00000639857 C2orf71A6NGG8 1288 aa19.5■□□□□ 0.71
PTPN11-207ENST00000639857 K7ERI5 159 aa19.5■□□□□ 0.71
PTPN11-207ENST00000639857 MBTPS2O43462 519 aa19.5■□□□□ 0.71
PTPN11-207ENST00000639857 B4GALT3O60512 393 aa19.5■□□□□ 0.71
PTPN11-207ENST00000639857 NR1I2O75469 434 aa19.5■□□□□ 0.71
PTPN11-207ENST00000639857 POMCP01189 267 aa19.5■□□□□ 0.71
PTPN11-207ENST00000639857 CTSAP10619 480 aa19.5■□□□□ 0.71
PTPN11-207ENST00000639857 NPTX2P47972 431 aa19.5■□□□□ 0.71
PTPN11-207ENST00000639857 AFF1P51825 1210 aaKnown RBP19.5■□□□□ 0.71
PTPN11-207ENST00000639857 PEX3P56589 373 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms