RNA–Protein interactions for RNA: ENST00000639848.1

HLA-B-256, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-256ENST00000639848 CEBPZQ03701 1054 aaKnown RBP22.27■■□□□ 1.16
HLA-B-256ENST00000639848 RNASELQ05823 741 aaKnown RBP22.27■■□□□ 1.16
HLA-B-256ENST00000639848 KARSQ15046 597 aaKnown RBP22.27■■□□□ 1.16
HLA-B-256ENST00000639848 SPIRE2Q8WWL2 714 aa22.27■■□□□ 1.16
HLA-B-256ENST00000639848 ZNF396Q96N95 335 aaPredicted RBP22.27■■□□□ 1.16
HLA-B-256ENST00000639848 KIFC3Q9BVG8 833 aa22.27■■□□□ 1.16
HLA-B-256ENST00000639848 NXF3Q9H4D5 531 aaKnown RBP22.27■■□□□ 1.16
HLA-B-256ENST00000639848 PDZD7Q9H5P4 517 aa22.27■■□□□ 1.16
HLA-B-256ENST00000639848 TMEM134Q9H6X4 195 aa22.27■■□□□ 1.16
HLA-B-256ENST00000639848 ODF2LQ9ULJ1 636 aa22.27■■□□□ 1.16
HLA-B-256ENST00000639848 GIT1Q9Y2X7 761 aa22.27■■□□□ 1.16
HLA-B-256ENST00000639848 ZC3H11AO75152 810 aaKnown RBP eCLIP22.26■■□□□ 1.15
HLA-B-256ENST00000639848 NPTXRO95502 500 aa22.26■■□□□ 1.15
HLA-B-256ENST00000639848 TXLNAP40222 546 aa22.26■■□□□ 1.15
HLA-B-256ENST00000639848 KRI1Q8N9T8 703 aaKnown RBP22.26■■□□□ 1.15
HLA-B-256ENST00000639848 PABPC5Q96DU9 382 aaKnown RBP22.26■■□□□ 1.15
HLA-B-256ENST00000639848 ADPGKQ9BRR6 497 aa22.26■■□□□ 1.15
HLA-B-256ENST00000639848 NRDE2Q9H7Z3 1164 aa22.26■■□□□ 1.15
HLA-B-256ENST00000639848 KMT5AQ9NQR1 393 aa22.26■■□□□ 1.15
HLA-B-256ENST00000639848 BLOC1S4Q9NUP1 217 aa22.26■■□□□ 1.15
HLA-B-256ENST00000639848 HES2Q9Y543 173 aa22.26■■□□□ 1.15
HLA-B-256ENST00000639848 ARL5CA6NH57 179 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 PLS3P13797 630 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 IRS1P35568 1242 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 PBX3P40426 434 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 TFF2Q03403 129 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 HYAL1Q12794 435 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 TMEM132AQ24JP5 1023 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 ARSHQ5FYA8 562 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 CDR2LQ86X02 465 aaPredicted RBP22.25■■□□□ 1.15
HLA-B-256ENST00000639848 LINC00301Q8NCQ3 95 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 RAD54LQ92698 747 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 EPSTI1Q96J88 318 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 RNF39Q9H2S5 420 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 LARSQ9P2J5 1176 aaKnown RBP22.25■■□□□ 1.15
HLA-B-256ENST00000639848 STK17AQ9UEE5 414 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 CCDC39Q9UFE4 941 aa22.25■■□□□ 1.15
HLA-B-256ENST00000639848 SPTBN5Q9NRC6 3674 aaKnown RBP22.24■■□□□ 1.15
HLA-B-256ENST00000639848 FSD2A1L4K1 749 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 TTLL13PA6NNM8 815 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 YEATS4O95619 227 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 F13A1P00488 732 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 GALTP07902 379 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 LIG1P18858 919 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 DDIT3P35638 169 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 SMTNP53814 917 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 RAD51AP2Q09MP3 1159 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 CTC1Q2NKJ3 1217 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 DCAF4L1Q3SXM0 396 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 USP49Q70CQ1 688 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 APBB1IPQ7Z5R6 666 aaPredicted RBP22.24■■□□□ 1.15
HLA-B-256ENST00000639848 GPBP1Q86WP2 473 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 LRRC15Q8TF66 581 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 LARP4BQ92615 738 aaKnown RBP22.24■■□□□ 1.15
HLA-B-256ENST00000639848 TMEM169Q96HH4 297 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 CLIC6Q96NY7 704 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 TMEM175Q9BSA9 504 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 NGRNQ9NPE2 291 aaKnown RBP22.24■■□□□ 1.15
HLA-B-256ENST00000639848 STK39Q9UEW8 545 aa22.24■■□□□ 1.15
HLA-B-256ENST00000639848 FSCN2O14926 492 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 PPP6R2O75170 966 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 EDN1P05305 212 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 SCP2P22307 547 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 MLH1P40692 756 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 AFF1P51825 1210 aaKnown RBP22.23■■□□□ 1.15
HLA-B-256ENST00000639848 ERVFC1P60507 584 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 STK38Q15208 465 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 NT5DC1Q5TFE4 455 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 ATF7IP2Q5U623 682 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 ATL3Q6DD88 541 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 ZNF280BQ86YH2 543 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 MICAL1Q8TDZ2 1067 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 KCNN1Q92952 543 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 FAM193BQ96PV7 902 aaPredicted RBP22.23■■□□□ 1.15
HLA-B-256ENST00000639848 GAD1Q99259 594 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 APOL6Q9BWW8 343 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 MRPL4Q9BYD3 311 aaKnown RBP22.23■■□□□ 1.15
HLA-B-256ENST00000639848 TNFSF13BQ9Y275 285 aa22.23■■□□□ 1.15
HLA-B-256ENST00000639848 SFI1A8K8P3 1242 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 H0YCG3 227 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 DDHD2O94830 711 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 POMCP01189 267 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 SLC11A1P49279 550 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 DSC1Q08554 894 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 MCM6Q14566 821 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 LEXMQ3ZCV2 418 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 SPECC1Q5M775 1068 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 TMEM161BQ8NDZ6 487 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 IGSF21Q96ID5 467 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 ZFP42Q96MM3 310 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 CDCA3Q99618 268 aaPredicted RBP22.22■■□□□ 1.15
HLA-B-256ENST00000639848 REEP2Q9BRK0 252 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 COL25A1Q9BXS0 654 aaPredicted RBP22.22■■□□□ 1.15
HLA-B-256ENST00000639848 GBP3Q9H0R5 595 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 DNAJB4Q9UDY4 337 aa22.22■■□□□ 1.15
HLA-B-256ENST00000639848 NT5C1B-RDH14C9J2C7 533 aa22.21■■□□□ 1.15
HLA-B-256ENST00000639848 SPTLC2O15270 562 aa22.21■■□□□ 1.15
HLA-B-256ENST00000639848 SLC16A4O15374 487 aa22.21■■□□□ 1.15
HLA-B-256ENST00000639848 B4GALT3O60512 393 aa22.21■■□□□ 1.15
HLA-B-256ENST00000639848 CSPG5O95196 566 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms