RNA–Protein interactions for RNA: ENST00000639525.1

SPIN3-223, Transcript of spindlin family member 3, human

TSL 5 BASIC

Gene SPIN3, Length 3,958 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-223	ENST00000639525	MARK3	P27448	753 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	TFAM	Q00059	246 aa	Known RBP	12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	ADCY2	Q08462	1091 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	SWSAP1	Q6NVH7	229 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	NT5DC3	Q86UY8	548 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	SLC47A2	Q86VL8	602 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	PALB2	Q86YC2	1186 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	MAK16	Q9BXY0	300 aa	Known RBP	12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	GABBR1	Q9UBS5	961 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	MIF4GD	A9UHW6	222 aa	Known RBP	12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	GOLGA8R	I6L899	631 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	NEBL	O76041	1014 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	SLITRK3	O94933	977 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	P4HB	P07237	508 aa	Known RBP	12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	CHRNA3	P32297	505 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	EPHA7	Q15375	998 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	PALM2	Q8IXS6	379 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	IQCK	Q8N0W5	287 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	TMEM117	Q9H0C3	514 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	KCTD10	Q9H3F6	313 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	ZWILCH	Q9H900	591 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	CHD2	O14647	1828 aa	Known RBP	12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	TMEM253	P0C7T8	217 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	PITPNM3	Q9BZ71	974 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	KCNH7	Q9NS40	1196 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	DDX20	Q9UHI6	824 aa	Known RBP	12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	DCTN4	Q9UJW0	460 aa		12.6	□□□□□ -0.39
SPIN3-223	ENST00000639525	NID2	Q14112	1375 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	KRT1	P04264	644 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	SRGAP2C	P0DJJ0	459 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	DDR1	Q08345	913 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	PPP2R5D	Q14738	602 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	BBS9	Q3SYG4	887 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	ZNF720	Q7Z2F6	126 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	PARP9	Q8IXQ6	854 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	GJD4	Q96KN9	370 aa	Predicted RBP	12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	PAGR1	Q9BTK6	254 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	INTU	Q9ULD6	942 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	TRPC6	Q9Y210	931 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	FOXO6	A8MYZ6	492 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	YWHAB	P31946	246 aa	Known RBP	12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	BYSL	Q13895	437 aa	Known RBP	12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	RASA3	Q14644	834 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	KRT39	Q6A163	491 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	KRT27	Q7Z3Y8	459 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	ARHGEF19	Q8IW93	802 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	RSAD2	Q8WXG1	361 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	PICK1	Q9NRD5	415 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	SPATA31C1	P0DKV0	1188 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	SPP2	Q13103	211 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	MAPK7	Q13164	816 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	SNRNP35	Q16560	246 aa	Known RBP	12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	C4orf33	Q8N1A6	199 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	LNX1	Q8TBB1	728 aa	Predicted RBP	12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	ACTRT1	Q8TDG2	376 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	LRRC8C	Q8TDW0	803 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	CALR3	Q96L12	384 aa	Known RBP	12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	CRAMP1	Q96RY5	1269 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	CALN1	Q9BXU9	219 aa		12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	ACTR5	Q9H9F9	607 aa	Predicted RBP	12.59	□□□□□ -0.39
SPIN3-223	ENST00000639525	IGBP1	P78318	339 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	BASP1	P80723	227 aa	Known RBP	12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	TMC3	Q7Z5M5	1100 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	CROCCP2	Q86T23	111 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	NIM1K	Q8IY84	436 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	PWWP2A	Q96N64	755 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	PURB	Q96QR8	312 aa	Known RBP	12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	KLF6	Q99612	283 aa	Predicted RBP	12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	FAM167B	Q9BTA0	163 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	PCSK1N	Q9UHG2	260 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	AJAP1	Q9UKB5	411 aa	Predicted RBP	12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	AFF2	P51816	1311 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	TMEM120B	A0PK00	339 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	PYGM	P11217	842 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	SREBF1	P36956	1147 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	HSPA9	P38646	679 aa	Known RBP	12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	IRX4	P78413	519 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	HHIPL2	Q6UWX4	724 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	TRAF3IP3	Q9Y228	551 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	SCN11A	Q9UI33	1791 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	SLC16A3	O15427	465 aa	Known RBP	12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	PIAS1	O75925	651 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	MYCN	P04198	464 aa	Predicted RBP	12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	NEDD9	Q14511	834 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	ANKMY2	Q8IV38	441 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	THNSL1	Q8IYQ7	743 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	VPS52	Q8N1B4	723 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	ANKRD35	Q8N283	1001 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	FBXL13	Q8NEE6	735 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	TTC16	Q8NEE8	873 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	GRK7	Q8WTQ7	553 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	CNKSR1	Q969H4	720 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	MCUR1	Q96AQ8	359 aa		12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	TGS1	Q96RS0	853 aa	Known RBP	12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525	DDX23	Q9BUQ8	820 aa	Known RBP	12.58	□□□□□ -0.4
SPIN3-223	ENST00000639525		K7ERI5	159 aa		12.57	□□□□□ -0.4
SPIN3-223	ENST00000639525	PIK3R2	O00459	728 aa		12.57	□□□□□ -0.4
SPIN3-223	ENST00000639525	NFIB	O00712	420 aa		12.57	□□□□□ -0.4
SPIN3-223	ENST00000639525	PHF2	O75151	1096 aa		12.57	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms