RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 PCIF1Q9H4Z3 704 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 ATP6V0A4Q9HBG4 840 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 TUFT1Q9NNX1 390 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 PFASO15067 1338 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 EMSYQ7Z589 1322 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 TISP43B9A030 160 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 GDF11O95390 407 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 RARAP10276 462 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 BCRP11274 1271 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 UBXN2AP68543 259 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 SLMAPQ14BN4 828 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 SYDE2Q5VT97 1194 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 TLDC1Q6P9B6 456 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 CROCCP2Q86T23 111 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 FMNL3Q8IVF7 1028 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 SYCP3Q8IZU3 236 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 DYDC1Q8WWB3 177 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 ART4Q93070 314 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 STAMBPL1Q96FJ0 436 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 COA1Q9GZY4 146 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 ACP6Q9NPH0 428 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 FOXO6A8MYZ6 492 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 ACSL3O95573 720 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 NDUFB10O96000 172 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 GBP1P32455 592 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 ZNF131P52739 623 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 KCNJ2P63252 427 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 SIX1Q15475 284 aaPredicted RBP11.73□□□□□ -0.53
SNIP1-204ENST00000638725 TAOK1Q7L7X3 1001 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 SLC13A5Q86YT5 568 aaPredicted RBP11.73□□□□□ -0.53
SNIP1-204ENST00000638725 DHX37Q8IY37 1157 aaKnown RBP11.73□□□□□ -0.53
SNIP1-204ENST00000638725 KIRREL3Q8IZU9 778 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 STMN4Q9H169 189 aaPredicted RBP11.73□□□□□ -0.53
SNIP1-204ENST00000638725 CDC42EP4Q9H3Q1 356 aaKnown RBP11.73□□□□□ -0.53
SNIP1-204ENST00000638725 MLXIPLQ9NP71 852 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 FGFR1OP2Q9NVK5 253 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 SUGT1Q9Y2Z0 365 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 L3MBTL1Q9Y468 752 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
SNIP1-204ENST00000638725 PSMD10O75832 226 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 SGPL1O95470 568 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 GGPS1O95749 300 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 CYP3A4P08684 503 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 PDE6CP51160 858 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 NCALDP61601 193 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 PPP3CAQ08209 521 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 CYP1B1Q16678 543 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 STXBP4Q6ZWJ1 553 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 CD101Q93033 1021 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 TEKT1Q969V4 418 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 MIEF2Q96C03 454 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 RPS6KC1Q96S38 1066 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 SEL1LQ9UBV2 794 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 UBE4BO95155 1302 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 PASKQ96RG2 1323 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 TAF1LQ8IZX4 1826 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 SMCHD1A6NHR9 2005 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 TCP11X1B4DZS4 312 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 SPOPO43791 374 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
SNIP1-204ENST00000638725 OAS1P00973 400 aaKnown RBP11.73□□□□□ -0.53
SNIP1-204ENST00000638725 GCLMP48507 274 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 CLNS1AP54105 237 aaKnown RBP11.73□□□□□ -0.53
SNIP1-204ENST00000638725 MFSD5Q6N075 450 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 MAEAQ7L5Y9 396 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 WNT8AQ9H1J5 351 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 TAOK3Q9H2K8 898 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 DNAJC17Q9NVM6 304 aaKnown RBP11.73□□□□□ -0.53
SNIP1-204ENST00000638725 CTNNAL1Q9UBT7 734 aa11.73□□□□□ -0.53
SNIP1-204ENST00000638725 USP15Q9Y4E8 981 aaPredicted RBP11.73□□□□□ -0.53
SNIP1-204ENST00000638725 SIPA1L1O43166 1804 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 TMEM120BA0PK00 339 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 CFAP73A6NFT4 308 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 TULP1O00294 542 aaPredicted RBP11.72□□□□□ -0.53
SNIP1-204ENST00000638725 RTN2O75298 545 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 DLATP10515 647 aaKnown RBP11.72□□□□□ -0.53
SNIP1-204ENST00000638725 CHRNB2P17787 502 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 RFX1P22670 979 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 GBP2P32456 591 aaPredicted RBP11.72□□□□□ -0.53
SNIP1-204ENST00000638725 MYO1EQ12965 1108 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 VSTM1Q6UX27 236 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 NSMFQ6X4W1 530 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 RNF207Q6ZRF8 634 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 CYFIP1Q7L576 1253 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 NOP9Q86U38 636 aaKnown RBP11.72□□□□□ -0.53
SNIP1-204ENST00000638725 ANKRD42Q8N9B4 389 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 ZSWIM2Q8NEG5 633 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 ZNF564Q8TBZ8 553 aaPredicted RBP11.72□□□□□ -0.53
SNIP1-204ENST00000638725 ARHGEF2Q92974 986 aaKnown RBP11.72□□□□□ -0.53
SNIP1-204ENST00000638725 AAASQ9NRG9 546 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 HOMER3Q9NSC5 361 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 MTUS1Q9ULD2 1270 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 CEP83Q9Y592 693 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 QSER1Q2KHR3 1735 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 HIP1RO75146 1068 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 ECEL1O95672 775 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 CFBP00751 764 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 GYS1P13807 737 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 NQO1P15559 274 aaKnown RBP11.72□□□□□ -0.53
SNIP1-204ENST00000638725 CHKAP35790 457 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms