RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 GAS2O43903 313 aaKnown RBP18.19■□□□□ 0.5
COLCA2-206ENST00000638573 WEE2P0C1S8 567 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 CDC25AP30304 524 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 PPM1AP35813 382 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 MLH1P40692 756 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 ALDH7A1P49419 539 aaKnown RBP18.19■□□□□ 0.5
COLCA2-206ENST00000638573 RAB27AP51159 221 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 RNASELQ05823 741 aaKnown RBP18.19■□□□□ 0.5
COLCA2-206ENST00000638573 COASYQ13057 564 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 PDIA5Q14554 519 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 FAM173BQ6P4H8 233 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 VPS52Q8N1B4 723 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 RABGGTAQ92696 567 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 IGSF21Q96ID5 467 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 GAD1Q99259 594 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 KIFC3Q9BVG8 833 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 CXCL16Q9H2A7 254 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 TUFT1Q9NNX1 390 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 PUF60Q9UHX1 559 aaKnown RBP18.19■□□□□ 0.5
COLCA2-206ENST00000638573 MUTYHQ9UIF7 546 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 VWA3AA6NCI4 1184 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 ASAP2O43150 1006 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 CLASP2O75122 1294 aaKnown RBP18.18■□□□□ 0.5
COLCA2-206ENST00000638573 NPTXRO95502 500 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 SSBP05455 408 aaKnown RBP eCLIP18.18■□□□□ 0.5
COLCA2-206ENST00000638573 AKAP5P24588 427 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 KRT17Q04695 432 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 MXD4Q14582 209 aaPredicted RBP18.18■□□□□ 0.5
COLCA2-206ENST00000638573 KRT79Q5XKE5 535 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 IFNLR1Q8IU57 520 aaPredicted RBP18.18■□□□□ 0.5
COLCA2-206ENST00000638573 EXOC8Q8IYI6 725 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 C12orf76Q8N812 135 aaPredicted RBP18.18■□□□□ 0.5
COLCA2-206ENST00000638573 MRPL43Q8N983 215 aaKnown RBP18.18■□□□□ 0.5
COLCA2-206ENST00000638573 IGSF22Q8N9C0 903 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 SNX29Q8TEQ0 813 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 POLR3CQ9BUI4 534 aaPredicted RBP18.18■□□□□ 0.5
COLCA2-206ENST00000638573 ZBP1Q9H171 429 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 S1PR5Q9H228 398 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 KLK14Q9P0G3 267 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 PRG3Q9Y2Y8 225 aaPredicted RBP18.18■□□□□ 0.5
COLCA2-206ENST00000638573 HCFC2Q9Y5Z7 792 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 C5orf42Q9H799 3197 aa18.18■□□□□ 0.5
COLCA2-206ENST00000638573 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.17■□□□□ 0.5
COLCA2-206ENST00000638573 CXCL14O95715 111 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 SKIP12755 728 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 ITGA4P13612 1032 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 LIG1P18858 919 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 NCLP19338 710 aaKnown RBP18.17■□□□□ 0.5
COLCA2-206ENST00000638573 RPA1P27694 616 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 CCT6AP40227 531 aaKnown RBP18.17■□□□□ 0.5
COLCA2-206ENST00000638573 SCNN1GP51170 649 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 CEBPZQ03701 1054 aaKnown RBP18.17■□□□□ 0.5
COLCA2-206ENST00000638573 PKP1Q13835 747 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 TMEM31Q5JXX7 168 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 ANKRD54Q6NXT1 300 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 PADI6Q6TGC4 694 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 TAS1R1Q7RTX1 841 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 PGBD4Q96DM1 585 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 TMEM169Q96HH4 297 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 C1QTNF1Q9BXJ1 281 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 CSRNP2Q9H175 543 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 MARCH5Q9NX47 278 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 CLIC4Q9Y696 253 aa18.17■□□□□ 0.5
COLCA2-206ENST00000638573 MYBP10242 640 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 EPCAMP16422 314 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 MUTP22033 750 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 TFDP1Q14186 410 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 SMC1AQ14683 1233 aaKnown RBP18.16■□□□□ 0.5
COLCA2-206ENST00000638573 STK38Q15208 465 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 KCNK18Q7Z418 384 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 RNF135Q8IUD6 432 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 SUSD6Q92537 303 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 RPGRIP1Q96KN7 1286 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 AK8Q96MA6 479 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 USP28Q96RU2 1077 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 NGRNQ9NPE2 291 aaKnown RBP18.16■□□□□ 0.5
COLCA2-206ENST00000638573 PRKAG3Q9UGI9 489 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 DBR1Q9UK59 544 aaKnown RBP18.16■□□□□ 0.5
COLCA2-206ENST00000638573 FAM50BQ9Y247 325 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 ATP6V1DQ9Y5K8 247 aa18.16■□□□□ 0.5
COLCA2-206ENST00000638573 ARHGEF35A5YM69 484 aa18.15■□□□□ 0.5
COLCA2-206ENST00000638573 ARL5CA6NH57 179 aa18.15■□□□□ 0.5
COLCA2-206ENST00000638573 NRP1O14786 923 aa18.15■□□□□ 0.5
COLCA2-206ENST00000638573 BRD1O95696 1058 aa18.15■□□□□ 0.5
COLCA2-206ENST00000638573 EEF1DP3Q658K8 133 aa18.15■□□□□ 0.5
COLCA2-206ENST00000638573 PDE12Q6L8Q7 609 aaKnown RBP18.15■□□□□ 0.5
COLCA2-206ENST00000638573 NOTUMQ6P988 496 aa18.15■□□□□ 0.5
COLCA2-206ENST00000638573 DDX53Q86TM3 631 aaKnown RBP18.15■□□□□ 0.5
COLCA2-206ENST00000638573 URGCPQ8TCY9 931 aa18.15■□□□□ 0.5
COLCA2-206ENST00000638573 B3GALT6Q96L58 329 aa18.15■□□□□ 0.5
COLCA2-206ENST00000638573 NACC1Q96RE7 527 aa18.15■□□□□ 0.5
COLCA2-206ENST00000638573 CDCA3Q99618 268 aaPredicted RBP18.15■□□□□ 0.5
COLCA2-206ENST00000638573 BHMT2Q9H2M3 363 aa18.15■□□□□ 0.5
COLCA2-206ENST00000638573 DDX19AQ9NUU7 478 aaKnown RBP18.15■□□□□ 0.5
COLCA2-206ENST00000638573 KIAA1024Q9UPX6 916 aa18.15■□□□□ 0.5
COLCA2-206ENST00000638573 E9PMD0 336 aa18.14■□□□□ 0.49
COLCA2-206ENST00000638573 DCXO43602 365 aa18.14■□□□□ 0.49
COLCA2-206ENST00000638573 XRCC6P12956 609 aaKnown RBP eCLIP18.14■□□□□ 0.49
COLCA2-206ENST00000638573 CYP11B2P19099 503 aa18.14■□□□□ 0.49
COLCA2-206ENST00000638573 LONP1P36776 959 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms