RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SLMAPQ14BN4 828 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 SPRED3Q2MJR0 410 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 PREPLQ4J6C6 727 aaPredicted RBP21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 ARHGEF19Q8IW93 802 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 C12orf56Q8IXR9 622 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 STMN4Q9H169 189 aaPredicted RBP21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 PCDHA3Q9Y5H8 950 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 SMCHD1A6NHR9 2005 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 MARCKSL1P49006 195 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 DLG4P78352 724 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 CYP1B1Q16678 543 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 CCDC137Q6PK04 289 aaKnown RBP21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 CCDC197Q8NCU1 140 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 ATXN2LQ8WWM7 1075 aaKnown RBP21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 GJD4Q96KN9 370 aaPredicted RBP21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 TAOK3Q9H2K8 898 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 ADAM7Q9H2U9 754 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 LARSQ9P2J5 1176 aaKnown RBP21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 ASAP2O43150 1006 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 GZMAP12544 262 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 COMTP21964 271 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 TTC27Q6P3X3 843 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 CCDC50Q8IVM0 306 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 SELENOSQ9BQE4 189 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 AZI2Q9H6S1 392 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 MTUS1Q9ULD2 1270 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 TLDC2A0PJX2 215 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 TMEM110-MUSTN1A8MSY1 372 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 PPP3CAQ08209 521 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 FUKQ8N0W3 1084 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 ANKS4BQ8N8V4 417 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 CD101Q93033 1021 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 SGSM3Q96HU1 749 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 SEMA4AQ9H3S1 761 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 CCDC134Q9H6E4 229 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 ARHGEF10LQ9HCE6 1279 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 TRPC6Q9Y210 931 aa21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 MRPL11Q9Y3B7 192 aaKnown RBP21.65■■□□□ 1.06
SYNGAP1-227ENST00000638142 COL2A1P02458 1487 aaPredicted RBP21.64■■□□□ 1.06
SYNGAP1-227ENST00000638142 FAM170AA1A519 330 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 ARP10275 920 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 UBXN2AP68543 259 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 MESDQ14696 234 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 ZDHHC14Q8IZN3 488 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 RIT2Q99578 217 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 IPO5O00410 1097 aaKnown RBP21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 RARGP13631 454 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 XRCC4Q13426 336 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 RRP1BQ14684 758 aaKnown RBP21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 WLSQ5T9L3 541 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 CYB5D1Q6P9G0 228 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 PADI6Q6TGC4 694 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 CYFIP1Q7L576 1253 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 MAGEC3Q8TD91 643 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 HVCN1Q96D96 273 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 ACCSQ96QU6 501 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 USP20Q9Y2K6 914 aa21.64■■□□□ 1.05
SYNGAP1-227ENST00000638142 MAPK13O15264 365 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 PMM2O15305 246 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 DNAJC8O75937 253 aaPredicted RBP21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 PDE6BP35913 854 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 GCLMP48507 274 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 ITIH4Q14624 930 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 PARP9Q8IXQ6 854 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 EPS8L1Q8TE68 723 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 RANBP17Q9H2T7 1088 aaKnown RBP21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 PCIF1Q9H4Z3 704 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 SLX4Q8IY92 1834 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 COILP38432 576 aaPredicted RBP21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 NEDD9Q14511 834 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 SNCBQ16143 134 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 ZNF746Q6NUN9 644 aaPredicted RBP21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 CCDC174Q6PII3 467 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 SLC13A5Q86YT5 568 aaPredicted RBP21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 ART4Q93070 314 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 MASTLQ96GX5 879 aa21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 INTS9Q9NV88 658 aaKnown RBP21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 NOCTQ9UK39 431 aaKnown RBP21.63■■□□□ 1.05
SYNGAP1-227ENST00000638142 PASKQ96RG2 1323 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 CCT8L1PA6NM43 557 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 TULP1O00294 542 aaPredicted RBP21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 RIPK2O43353 540 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 PYGMP11217 842 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 ECE1P42892 770 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 IFI35P80217 286 aaPredicted RBP21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 TNFAIP8L3Q5GJ75 292 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 PIGWQ7Z7B1 504 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 CCDC105Q8IYK2 499 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 FAM71AQ8IYT1 594 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 XXYLT1Q8NBI6 393 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 CSRNP1Q96S65 589 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 PCDHB18PQ96TA0 734 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 TDRD3Q9H7E2 651 aaKnown RBP21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 MCM8Q9UJA3 840 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 TMX2Q9Y320 296 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 C21orf2O43822 256 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 CHRNB2P17787 502 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 C1orf220Q5T0J3 134 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 C12orf50Q8NA57 414 aaPredicted RBP21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 CHURC1Q8WUH1 139 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms