RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 ADORA1P30542 326 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 CRKLP46109 303 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 BEST2Q8NFU1 509 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 ELAC2Q9BQ52 826 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 HAUS4Q9H6D7 363 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 ABCA5Q8WWZ7 1642 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 GRAMD1CQ8IYS0 662 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 APOBEC2Q9Y235 224 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 TBX22Q9Y458 520 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 ARHGEF7Q14155 803 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 PAN2Q504Q3 1202 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 EXD1Q8NHP7 514 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 SPATA18Q8TC71 538 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 IPCEF1Q8WWN9 437 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 TRAPPC8Q9Y2L5 1435 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 COPEO14579 308 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 ATP9BO43861 1147 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 PFKFB2O60825 505 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 ARF5P84085 180 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 DHX9Q08211 1270 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 TRIP4Q15650 581 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 SHROOM1Q2M3G4 852 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 C6orf118Q5T5N4 469 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 CAMKK1Q8N5S9 505 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 TSSK1BQ9BXA7 367 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 LOC102724428A0A0B4J2F2 783 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 SIK1P57059 783 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 OOSP2Q86WS3 158 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 LEMD2Q8NC56 503 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 OPTNQ96CV9 577 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 PNMA5Q96PV4 448 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 SH3GL2Q99962 352 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 CHRNA3P32297 505 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 ATP12AP54707 1039 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 MAPRE1Q15691 268 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 MIIPQ5JXC2 388 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 FOXP1Q9H334 677 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 PCSK1NQ9UHG2 260 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 YEATS2Q9ULM3 1422 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 ICA1LQ8NDH6 482 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 PRR12Q9ULL5 1215 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 IQCA1LA6NCM1 817 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 PHKA1P46020 1223 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 HPCAP84074 193 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 PPP1R2P3Q6NXS1 205 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 SYT2Q8N9I0 419 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 IGFLR1Q9H665 355 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 POLD4Q9HCU8 107 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 MAD2L2Q9UI95 211 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 CARMIL3Q8ND23 1372 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 GPC3P51654 580 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 RIN3Q8TB24 985 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 TBCKQ8TEA7 893 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 PIM2Q9P1W9 311 aa17.27■□□□□ 0.36
CACNA1A-258ENST00000638029 BLMP54132 1417 aaPredicted RBP17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 PYGBP11216 843 aa17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 GYS2P54840 703 aa17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 NANOGNBQ7Z5D8 188 aa17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 FRMD6Q96NE9 622 aa17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 ALG13Q9NP73 1137 aaKnown RBP17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 TTLL6Q8N841 843 aa17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 ZNF304Q9HCX3 659 aa17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 ABCB11O95342 1321 aa17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 FAM47E-STBD1D6RA91 191 aa17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 TNPO2O14787 897 aaKnown RBP17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 BZW1Q7L1Q6 419 aaKnown RBP17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 AGAP3Q96P47 875 aa17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 PNKPQ96T60 521 aa17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 PCDHA7Q9UN72 937 aa17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 ABCC12Q96J65 1359 aa17.27■□□□□ 0.35
CACNA1A-258ENST00000638029 ACTN3Q08043 901 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 LAMC2Q13753 1193 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 PLCL1Q15111 1095 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 NOL9Q5SY16 702 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 EFHBQ8N7U6 833 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 BTBD6Q96KE9 485 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 UTP6Q9NYH9 597 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 PHKG2P15735 406 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 RBL2Q08999 1139 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 NUGGCQ68CJ6 796 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 GPBP1L1Q9HC44 474 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 AATKQ6ZMQ8 1374 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 HMOX2P30519 316 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 MED21Q13503 144 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 SURF1Q15526 300 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 CENPUQ71F23 418 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 RNASE11Q8TAA1 199 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 ADAM33Q9BZ11 813 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 MAGEB5Q9BZ81 275 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 IL1RL2Q9HB29 575 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 ZSWIM6Q9HCJ5 1215 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 NOP53Q9NZM5 478 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 PDE8BO95263 885 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 MGAT5BQ3V5L5 792 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 MIER2Q8N344 545 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 STMN3Q9NZ72 180 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 TEX28O15482 410 aa17.26■□□□□ 0.35
CACNA1A-258ENST00000638029 SMARCA1P28370 1054 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms