RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	NPR3	P17342	541 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	AOC1	P19801	751 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	DDIT3	P35638	169 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	TXK	P42681	527 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	POLG	P54098	1239 aa	Predicted RBP	10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	KRT85	P78386	507 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	ATP2C1	P98194	919 aa	Predicted RBP	10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	PRKCE	Q02156	737 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	PPP2R5C	Q13362	524 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	TDG	Q13569	410 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	PKP1	Q13835	747 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	PDIA5	Q14554	519 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	ANGPT1	Q15389	498 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	SF3A1	Q15459	793 aa	Known RBP	10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	LONRF3	Q496Y0	759 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	DTHD1	Q6ZMT9	781 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	CCDC149	Q6ZUS6	474 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	OTOP3	Q7RTS5	596 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	MIER3	Q7Z3K6	550 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	CCDC105	Q8IYK2	499 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	ERMN	Q8TAM6	284 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	HAS1	Q92839	578 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	IGSF21	Q96ID5	467 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	SFXN1	Q9H9B4	322 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	NRBP2	Q9NSY0	501 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	FBXL21	Q9UKT6	434 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	DUSP12	Q9UNI6	340 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	MORC2	Q9Y6X9	1032 aa	Predicted RBP	10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	DMD	P11532	3685 aa		10.53	□□□□□ -0.72
CACNA1A-256	ENST00000637981	TCHH	Q07283	1943 aa		10.52	□□□□□ -0.72
CACNA1A-256	ENST00000637981	DENND4A	Q7Z401	1863 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	YEATS4	O95619	227 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	GALT	P07902	379 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	PHKA2	P46019	1235 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	RNASEL	Q05823	741 aa	Known RBP	10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	TBC1D8B	Q0IIM8	1120 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	NBR1	Q14596	966 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	STK38	Q15208	465 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	TWF2	Q6IBS0	349 aa	Known RBP	10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	GPR149	Q86SP6	731 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	PPFIBP1	Q86W92	1011 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SIX5	Q8N196	739 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	DTWD2	Q8NBA8	298 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	RSPH1	Q8WYR4	309 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	LPP	Q93052	612 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	RTP3	Q9BQQ7	232 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	GCOM2	Q9BZD3	368 aa	Predicted RBP	10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SCAND2P	Q9GZW5	306 aa	Predicted RBP	10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	NRDE2	Q9H7Z3	1164 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	KCNK12	Q9HB15	430 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CHST12	Q9NRB3	414 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	DISC1	Q9NRI5	854 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	TBC1D13	Q9NVG8	400 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	INPP5F	Q9Y2H2	1132 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	DCHS1	Q96JQ0	3298 aa		10.52	□□□□□ -0.73
CACNA1A-256	ENST00000637981	ARID2	Q68CP9	1835 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	PTPRZ1	P23471	2315 aa	Predicted RBP	10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	WNT7A	O00755	349 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CHMP2A	O43633	222 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SKI	P12755	728 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	NASP	P49321	788 aa	Predicted RBP	10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CLCN4	P51793	760 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	DRP2	Q13474	957 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SLC39A14	Q15043	492 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	EPHA7	Q15375	998 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	PTPN14	Q15678	1187 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	UGCG	Q16739	394 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	NOMO2	Q5JPE7	1267 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	HAUS3	Q68CZ6	603 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	GLB1L	Q6UWU2	654 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	C4orf32	Q8N8J7	132 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	KCNG4	Q8TDN1	519 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	AK8	Q96MA6	479 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	USP28	Q96RU2	1077 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	TRAIP	Q9BWF2	469 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	EMILIN2	Q9BXX0	1053 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	GBP3	Q9H0R5	595 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	TMEM60	Q9H2L4	133 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	UNC45A	Q9H3U1	944 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	DNAJB4	Q9UDY4	337 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	PIN4	Q9Y237	131 aa	Known RBP	10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	ZDHHC9	Q9Y397	364 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981	VPS13A	Q96RL7	3174 aa		10.51	□□□□□ -0.73
CACNA1A-256	ENST00000637981		A0A087WZ62	844 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	MEIS3P2	A8K0S8	358 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	STK25	O00506	426 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SPTLC2	O15270	562 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SLC26A4	O43511	780 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	PPP6R2	O75170	966 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	OFD1	O75665	1012 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SSB	P05455	408 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	P4HB	P07237	508 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CD44	P16070	742 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	NCL	P19338	710 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	MUT	P22033	750 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SFPQ	P23246	707 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	KLRC2	P26717	231 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	LONP1	P36776	959 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SLC11A1	P49279	550 aa		10.5	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms