RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 ARHGAP44Q17R89 818 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 EPC2Q52LR7 807 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 LMBRD2Q68DH5 695 aaPredicted RBP23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 RBM47A0AV96 593 aaKnown RBP23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 FAM170AA1A519 330 aa23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 KRT86O43790 486 aa23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 ADCY3O60266 1144 aa23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 HARSP12081 509 aaKnown RBP23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 GARTP22102 1010 aa23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 MAGEA1P43355 309 aa23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 ACOT2P49753 483 aa23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 LAMTOR4Q0VGL1 99 aa23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 KIF5AQ12840 1032 aa23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 SEZ6Q53EL9 994 aa23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 RHPN2Q8IUC4 686 aa23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 RNF149Q8NC42 400 aa23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 EHBP1Q8NDI1 1231 aa23.52■■□□□ 1.36
CHRNA7-228ENST00000637519 ENC1O14682 589 aa23.52■■□□□ 1.35
CHRNA7-228ENST00000637519 METTL13Q8N6R0 699 aa23.52■■□□□ 1.35
CHRNA7-228ENST00000637519 PPTC7Q8NI37 304 aa23.52■■□□□ 1.35
CHRNA7-228ENST00000637519 PSPC1Q8WXF1 523 aaKnown RBP23.52■■□□□ 1.35
CHRNA7-228ENST00000637519 SEMA4DQ92854 862 aa23.52■■□□□ 1.35
CHRNA7-228ENST00000637519 MFSD14AQ96MC6 490 aa23.52■■□□□ 1.35
CHRNA7-228ENST00000637519 PACSIN1Q9BY11 444 aa23.52■■□□□ 1.35
CHRNA7-228ENST00000637519 ERAP1Q9NZ08 941 aa23.52■■□□□ 1.35
CHRNA7-228ENST00000637519 FLRT1Q9NZU1 646 aa23.52■■□□□ 1.35
CHRNA7-228ENST00000637519 MRFAP1Q9Y605 127 aa23.52■■□□□ 1.35
CHRNA7-228ENST00000637519 IGKV6-21A0A0C4DH24 114 aa23.51■■□□□ 1.35
CHRNA7-228ENST00000637519 MANSC4A6NHS7 340 aaPredicted RBP23.51■■□□□ 1.35
CHRNA7-228ENST00000637519 MATR3P43243 847 aaKnown RBP eCLIP23.51■■□□□ 1.35
CHRNA7-228ENST00000637519 RBM10P98175 930 aaKnown RBP23.51■■□□□ 1.35
CHRNA7-228ENST00000637519 ACVR2BQ13705 512 aa23.51■■□□□ 1.35
CHRNA7-228ENST00000637519 KAT5Q92993 513 aa23.51■■□□□ 1.35
CHRNA7-228ENST00000637519 LENG1Q96BZ8 264 aaPredicted RBP23.51■■□□□ 1.35
CHRNA7-228ENST00000637519 NLRP4Q96MN2 994 aa23.51■■□□□ 1.35
CHRNA7-228ENST00000637519 PPP1R16BQ96T49 567 aa23.51■■□□□ 1.35
CHRNA7-228ENST00000637519 CARD6Q9BX69 1037 aa23.51■■□□□ 1.35
CHRNA7-228ENST00000637519 SUCLA2Q9P2R7 463 aaPredicted RBP23.51■■□□□ 1.35
CHRNA7-228ENST00000637519 SALL4Q9UJQ4 1053 aa23.51■■□□□ 1.35
CHRNA7-228ENST00000637519 CTAGE9A4FU28 777 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 SLC15A5A6NIM6 579 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 RBAK-RBAKDNI3L0D1 243 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 EVI5O60447 810 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 INSRRP14616 1297 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 GRM1Q13255 1194 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 SLC18A3Q16572 532 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 IER5Q5VY09 327 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 ZNF662Q6ZS27 426 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 ZIC5Q96T25 663 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 AGO2Q9UKV8 859 aaKnown RBP23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 CAPN6Q9Y6Q1 641 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 HBP1O60381 514 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 SLC26A2P50443 739 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 NCBP1Q09161 790 aaKnown RBP23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 CCL14Q16627 93 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 EFCAB12Q6NXP0 572 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 IFNL1Q8IU54 200 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 PPP1R13LQ8WUF5 828 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 UBE2TQ9NPD8 197 aaPredicted RBP23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 MYO6Q9UM54 1294 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 DOCK3Q8IZD9 2030 aa23.5■■□□□ 1.35
CHRNA7-228ENST00000637519 EXTL3O43909 919 aa23.49■■□□□ 1.35
CHRNA7-228ENST00000637519 N4BP1O75113 896 aaKnown RBP23.49■■□□□ 1.35
CHRNA7-228ENST00000637519 SOX5P35711 763 aa23.49■■□□□ 1.35
CHRNA7-228ENST00000637519 STAT1P42224 750 aa23.49■■□□□ 1.35
CHRNA7-228ENST00000637519 MORN1Q5T089 497 aa23.49■■□□□ 1.35
CHRNA7-228ENST00000637519 ZNF710Q8N1W2 664 aa23.49■■□□□ 1.35
CHRNA7-228ENST00000637519 TAS1R2Q8TE23 839 aa23.49■■□□□ 1.35
CHRNA7-228ENST00000637519 NAPGQ99747 312 aaPredicted RBP23.49■■□□□ 1.35
CHRNA7-228ENST00000637519 C16orf70Q9BSU1 422 aa23.49■■□□□ 1.35
CHRNA7-228ENST00000637519 STK33Q9BYT3 514 aa23.49■■□□□ 1.35
CHRNA7-228ENST00000637519 MYO1AQ9UBC5 1043 aa23.49■■□□□ 1.35
CHRNA7-228ENST00000637519 MOCS3O95396 460 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 C22orf31O95567 290 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 PIGRP01833 764 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 SLC10A3P09131 477 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 IRX5P78411 483 aaPredicted RBP23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 CRELD2Q6UXH1 353 aaPredicted RBP23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 CCDC113Q9H0I3 377 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 ABHD16BQ9H3Z7 469 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 TMEM134Q9H6X4 195 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 HDAC6Q9UBN7 1215 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 STYXL1Q9Y6J8 313 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 PTPRJQ12913 1337 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 PASKQ96RG2 1323 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 ZNF233A6NK53 670 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 PRKCIP41743 596 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 CETN1Q12798 172 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 DUSP28Q4G0W2 176 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 ZBTB33Q86T24 672 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 OR6J1Q8NGC5 347 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 TCP11Q8WWU5 503 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 SECISBP2LQ93073 1101 aaKnown RBP23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 MSTO1Q9BUK6 570 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 KCNG1Q9UIX4 513 aa23.48■■□□□ 1.35
CHRNA7-228ENST00000637519 FOXN3O00409 490 aaPredicted RBP23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 P4HA2O15460 535 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 MSCO60682 206 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 ATP1A1P05023 1023 aaKnown RBP23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 MAP2K5Q13163 448 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms