RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	PPIP5K2	O43314	1243 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	RIPK2	O43353	540 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CYP3A4	P08684	503 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	SRRM1	Q8IYB3	904 aa	Known RBP	14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	UBL4B	Q8N7F7	174 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ZNF653	Q96CK0	615 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CARD9	Q9H257	536 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CDC42EP4	Q9H3Q1	356 aa	Known RBP	14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	MTRF1L	Q9UGC7	380 aa	Known RBP	14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	IGF2BP3	O00425	579 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	SPAG7	O75391	227 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	NEBL	O76041	1014 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	PTGIR	P43119	386 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CRK	P46108	304 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	NOV	P48745	357 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	SP4	Q02446	784 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	BFSP1	Q12934	665 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	RRP1B	Q14684	758 aa	Known RBP	14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	SYDE2	Q5VT97	1194 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	C1orf186	Q6ZWK4	172 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	SH3BP5L	Q7L8J4	393 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	NOP9	Q86U38	636 aa	Known RBP	14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CCDC50	Q8IVM0	306 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CYP4X1	Q8N118	509 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ACER1	Q8TDN7	264 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	AGAP11	Q8TF27	550 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	FAM167B	Q9BTA0	163 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	PAGR1	Q9BTK6	254 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ECT2	Q9H8V3	914 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	FBXO28	Q9NVF7	368 aa		14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
CHRNA7-223	ENST00000637033	PFAS	O15067	1338 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CES2	O00748	559 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	TOM1	O60784	492 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	PHF2	O75151	1096 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	GJB6	O95452	261 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	KRT5	P13647	590 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	MMP13	P45452	471 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	MPP2	Q14168	576 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	OTOP1	Q7RTM1	612 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ZC3H3	Q8IXZ2	948 aa	Known RBP	14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	SPOCK2	Q92563	424 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	LXN	Q9BS40	222 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	NENF	Q9UMX5	172 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	UST	Q9Y2C2	406 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	GSTTP1	A0A1W2PQM5	241 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ARHGEF35	A5YM69	484 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	DIAPH2	O60879	1101 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CALCOCO2	Q13137	446 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ARHGAP27	Q6ZUM4	889 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	FAM163A	Q96GL9	167 aa	Predicted RBP	14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ZSWIM1	Q9BR11	485 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	HERPUD2	Q9BSE4	406 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ZNF577	Q9BSK1	485 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	NAV1	Q8NEY1	1877 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	PEX19	P40855	299 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ERF	P50548	548 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	KRT17	Q04695	432 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ABCB5	Q2M3G0	1257 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	RNF207	Q6ZRF8	634 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	PLEKHO2	Q8TD55	490 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	TXLNGY	Q9BZA5	131 aa		14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CNOT10	Q9H9A5	744 aa	Known RBP	14	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CLRN2	A0PK11	232 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	C5orf60	A6NFR6	353 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	PPEF1	O14829	653 aa	Predicted RBP	13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ANP32D	O95626	131 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	GYS1	P13807	737 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CHRNB2	P17787	502 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ALDH5A1	P51649	535 aa	Predicted RBP	13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	EIF3B	P55884	814 aa	Known RBP	13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	GPC5	P78333	572 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CNGA2	Q16280	664 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	PASD1	Q8IV76	773 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	KLHL29	Q96CT2	875 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	HSD17B14	Q9BPX1	270 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	UNC45A	Q9H3U1	944 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	PRR12	Q9ULL5	1215 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033		A0A0A6YYK5	440 aa	Predicted RBP	13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	SLC16A4	O15374	487 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	KRT16	P08779	473 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	BMP3	P12645	472 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	COIL	P38432	576 aa	Predicted RBP	13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	SGO2	Q562F6	1265 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CPA5	Q8WXQ8	436 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	RMDN2	Q96LZ7	410 aa		13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	NAP1L3	Q99457	506 aa	Predicted RBP	13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.99	□□□□□ -0.17
CHRNA7-223	ENST00000637033	ATXN2	Q99700	1313 aa	Known RBP	13.98	□□□□□ -0.17
CHRNA7-223	ENST00000637033	TCP10L2	B9ZVM9	353 aa		13.98	□□□□□ -0.17
CHRNA7-223	ENST00000637033	SREBF1	P36956	1147 aa		13.98	□□□□□ -0.17
CHRNA7-223	ENST00000637033	XRCC4	Q13426	336 aa		13.98	□□□□□ -0.17
CHRNA7-223	ENST00000637033	KAZN	Q674X7	775 aa		13.98	□□□□□ -0.17
CHRNA7-223	ENST00000637033	TRIM68	Q6AZZ1	485 aa		13.98	□□□□□ -0.17
CHRNA7-223	ENST00000637033	MIGA2	Q7L4E1	593 aa		13.98	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CBWD2	Q8IUF1	395 aa		13.98	□□□□□ -0.17
CHRNA7-223	ENST00000637033	CPXCR1	Q8N123	301 aa		13.98	□□□□□ -0.17
CHRNA7-223	ENST00000637033	FIZ1	Q96SL8	496 aa		13.98	□□□□□ -0.17
CHRNA7-223	ENST00000637033	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.98	□□□□□ -0.17

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