RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 COPS2P61201 443 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 L3MBTL3Q96JM7 780 aaPredicted RBP17.08■□□□□ 0.32
CLN5-208ENST00000636183 BRIP1Q9BX63 1249 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 NHEJ1Q9H9Q4 299 aaPredicted RBP17.08■□□□□ 0.32
CLN5-208ENST00000636183 SNX9Q9Y5X1 595 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 SMARCA1P28370 1054 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 TMEM132BQ14DG7 1078 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 FOXR1Q6PIV2 292 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 UPF3AQ9H1J1 476 aaKnown RBP17.07■□□□□ 0.32
CLN5-208ENST00000636183 KDM4CQ9H3R0 1056 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 FGFR1OP2Q9NVK5 253 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 AGO2Q9UKV8 859 aaKnown RBP17.07■□□□□ 0.32
CLN5-208ENST00000636183 POLRMTO00411 1230 aaKnown RBP17.07■□□□□ 0.32
CLN5-208ENST00000636183 CHRNA3P32297 505 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 C1orf131Q8NDD1 294 aaKnown RBP17.07■□□□□ 0.32
CLN5-208ENST00000636183 PLXNC1O60486 1568 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 SAMD9Q5K651 1589 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 POTEFA5A3E0 1075 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 POTEIP0CG38 1075 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 VAMP7P51809 220 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 NAALADL2Q58DX5 795 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 POTEGQ6S5H5 508 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 POTEEQ6S8J3 1075 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 OTUB1Q96FW1 271 aaPredicted RBP17.07■□□□□ 0.32
CLN5-208ENST00000636183 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.07■□□□□ 0.32
CLN5-208ENST00000636183 ADGRL3Q9HAR2 1447 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 CSE1LP55060 971 aaKnown RBP17.07■□□□□ 0.32
CLN5-208ENST00000636183 HIST1H2AGP0C0S8 130 aaPredicted RBP17.07■□□□□ 0.32
CLN5-208ENST00000636183 HIST1H2ADP20671 130 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 RGS7P49802 495 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 KCNB1Q14721 858 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 ALKBH2Q6NS38 261 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 HIST1H2AHQ96KK5 128 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 HIST1H2AJQ99878 128 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 SH2D3AQ9BRG2 576 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 H2AFJQ9BTM1 129 aa17.07■□□□□ 0.32
CLN5-208ENST00000636183 TPX2Q9ULW0 747 aaKnown RBP17.07■□□□□ 0.32
CLN5-208ENST00000636183 HSD17B4P51659 736 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 DR1Q01658 176 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 DACH2Q96NX9 599 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 PCDHA13Q9Y5I0 950 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 CCDC78A2IDD5 438 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 TFDP2Q14188 446 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 ITPRIPL1Q6GPH6 555 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 MTMR6Q9Y217 621 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 BAATQ14032 418 aaPredicted RBP17.06■□□□□ 0.32
CLN5-208ENST00000636183 KRT80Q6KB66 452 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 PABPC5Q96DU9 382 aaKnown RBP17.06■□□□□ 0.32
CLN5-208ENST00000636183 SMARCAD1Q9H4L7 1026 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 CTTNBP2Q8WZ74 1663 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 SPATA31A3Q5VYP0 1347 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 PCSK7Q16549 785 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 QRICH1Q2TAL8 776 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 C10orf53Q8N6V4 93 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 NR3C1P04150 777 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 TBXAS1P24557 533 aaPredicted RBP17.06■□□□□ 0.32
CLN5-208ENST00000636183 ETFBP38117 255 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 DHX9Q08211 1270 aaKnown RBP17.06■□□□□ 0.32
CLN5-208ENST00000636183 PID1Q7Z2X4 250 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 PPP1R14AQ96A00 147 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 SYNCRIPO60506 623 aaKnown RBP17.06■□□□□ 0.32
CLN5-208ENST00000636183 PQBP1O60828 265 aaKnown RBP17.06■□□□□ 0.32
CLN5-208ENST00000636183 SP100P23497 879 aaPredicted RBP17.06■□□□□ 0.32
CLN5-208ENST00000636183 DUOXA2Q1HG44 320 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 SLFNL1Q499Z3 407 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 FASTKD1Q53R41 847 aaKnown RBP17.06■□□□□ 0.32
CLN5-208ENST00000636183 ASPSCR1Q9BZE9 553 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 ITIH6Q6UXX5 1313 aa17.06■□□□□ 0.32
CLN5-208ENST00000636183 PZPP20742 1482 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 CCDC151A5D8V7 595 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 COPEO14579 308 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 RAG1P15918 1043 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 CRLF3Q8IUI8 442 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 NAF1Q96HR8 494 aaKnown RBP17.05■□□□□ 0.32
CLN5-208ENST00000636183 SRPRBQ9Y5M8 271 aaKnown RBP17.05■□□□□ 0.32
CLN5-208ENST00000636183 FAM135BQ49AJ0 1406 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 STAG3L1P0CL83 205 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 TMPRSS15P98073 1019 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 CCDC15Q0P6D6 951 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 FLOT2Q14254 428 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 DGKDQ16760 1214 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 DEFB132Q7Z7B7 95 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 PAGE5Q96GU1 130 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 PCDHA10Q9Y5I2 948 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 OVOS2A0A0G2JMS6 1433 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 OVOS2A0A0J9YW53 1432 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 OVOS2Q6IE36 1432 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 KIZQ2M2Z5 673 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 ERAP2Q6P179 960 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 GPD1LQ8N335 351 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 MARCH10Q8NA82 808 aaPredicted RBP17.05■□□□□ 0.32
CLN5-208ENST00000636183 ATP11CQ8NB49 1132 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 TLR2O60603 784 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 CYP2C9P11712 490 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 C10orf120Q5SQS8 335 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 SYCP2LQ5T4T6 812 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 RGL4Q8IZJ4 473 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 AGAP3Q96P47 875 aa17.05■□□□□ 0.32
CLN5-208ENST00000636183 CYP26B1Q9NR63 512 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms