RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 C17orf80Q9BSJ5 609 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 TRIM9Q9C026 710 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 LRRC27Q9C0I9 530 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 ZHX3Q9H4I2 956 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 PDZD7Q9H5P4 517 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 CERS4Q9HA82 394 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 MAGEF1Q9HAY2 307 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 CHD7Q9P2D1 2997 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 IPPQ9Y573 584 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 MRPL42Q9Y6G3 142 aaKnown RBP10.71□□□□□ -0.69
LINC00339-210ENST00000635675 EPOPA6NHQ4 379 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 TBKBP1A7MCY6 615 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 H0YCG3 227 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 N4BP3O15049 544 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 ACTN4O43707 911 aaKnown RBP10.7□□□□□ -0.7
LINC00339-210ENST00000635675 OFD1O75665 1012 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 SLFN14P0C7P3 912 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 GAP43P17677 238 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 BMPR1AP36894 532 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 NDUFA8P51970 172 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 AMPD3Q01432 767 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 LONRF3Q496Y0 759 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 PAN2Q504Q3 1202 aaKnown RBP10.7□□□□□ -0.7
LINC00339-210ENST00000635675 EPC2Q52LR7 807 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 ATF7IP2Q5U623 682 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 EEF1DP3Q658K8 133 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 LRRC55Q6ZSA7 311 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 TMEM192Q8IY95 271 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 HELQQ8TDG4 1101 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 ARNTL2Q8WYA1 636 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 SAMD11Q96NU1 681 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 ACO2Q99798 780 aaKnown RBP10.7□□□□□ -0.7
LINC00339-210ENST00000635675 C7orf25Q9BPX7 421 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 TARS2Q9BW92 718 aaKnown RBP10.7□□□□□ -0.7
LINC00339-210ENST00000635675 MRPL4Q9BYD3 311 aaKnown RBP10.7□□□□□ -0.7
LINC00339-210ENST00000635675 ST6GALNAC4Q9H4F1 302 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 PRDM12Q9H4Q4 367 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 PTPRHQ9HD43 1115 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 SEL1LQ9UBV2 794 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 SERTAD1Q9UHV2 236 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 TNFSF13BQ9Y275 285 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 HES2Q9Y543 173 aa10.7□□□□□ -0.7
LINC00339-210ENST00000635675 ABLIM1O14639 778 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 INPPL1O15357 1258 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 NPTXRO95502 500 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 ITGA4P13612 1032 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 IDEP14735 1019 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 PROZP22891 400 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 NMT1P30419 496 aaKnown RBP10.69□□□□□ -0.7
LINC00339-210ENST00000635675 GTF2BQ00403 316 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 STRN3Q13033 797 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 GLB1LQ6UWU2 654 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 ZPBP2Q6X784 338 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 ZNF720Q7Z2F6 126 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 SFR1Q86XK3 245 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 FAM178BQ8IXR5 827 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 ABI1Q8IZP0 508 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 FSIP1Q8NA03 581 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 SLC17A8Q8NDX2 589 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 RSPH1Q8WYR4 309 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 MRPS27Q92552 414 aaKnown RBP10.69□□□□□ -0.7
LINC00339-210ENST00000635675 STRA6Q9BX79 667 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 TRIM6Q9C030 488 aaPredicted RBP10.69□□□□□ -0.7
LINC00339-210ENST00000635675 GOLPH3LQ9H4A5 285 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 NXF3Q9H4D5 531 aaKnown RBP10.69□□□□□ -0.7
LINC00339-210ENST00000635675 CWH43Q9H720 699 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 UBN1Q9NPG3 1134 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 OLFML3Q9NRN5 406 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 TYW1Q9NV66 732 aaKnown RBP10.69□□□□□ -0.7
LINC00339-210ENST00000635675 PANK4Q9NVE7 773 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 USP25Q9UHP3 1055 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 MTUS1Q9ULD2 1270 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 TBX20Q9UMR3 447 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 RWDD3Q9Y3V2 267 aa10.69□□□□□ -0.7
LINC00339-210ENST00000635675 RALGAPA2Q2PPJ7 1873 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 NLRC5Q86WI3 1866 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 C5orf67F2Z3F1 127 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 K7ENM7 598 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 RFXAPO00287 272 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 LPXNO60711 386 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 PPP1R37O75864 691 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 RB1P06400 928 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 ABCD1P33897 745 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 SYKP43405 635 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 AFMP43652 599 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 AFF1P51825 1210 aaKnown RBP10.68□□□□□ -0.7
LINC00339-210ENST00000635675 ADGRE1Q14246 886 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 TMEM132AQ24JP5 1023 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 ZC2HC1CQ53FD0 456 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-210ENST00000635675 HERC4Q5GLZ8 1057 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-210ENST00000635675 NOMO2Q5JPE7 1267 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 CCDC65Q8IXS2 484 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 CEP57L1Q8IYX8 460 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 LRRC43Q8N309 656 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 MYLIPQ8WY64 445 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 PAGE5Q96GU1 130 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 ADPGKQ9BRR6 497 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 RSAD1Q9HA92 442 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 HCSTQ9UBK5 93 aa10.68□□□□□ -0.7
LINC00339-210ENST00000635675 GIT1Q9Y2X7 761 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms