RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, human

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF4-208	ENST00000634348	REXO4	Q9GZR2	422 aa	Known RBP	12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	ARPP21	Q9UBL0	812 aa	Predicted RBP	12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	TARSL2	A2RTX5	802 aa	Known RBP	12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	DNAL1	Q4LDG9	190 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	MLXIPL	Q9NP71	852 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	COL4A3BP	Q9Y5P4	624 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	KIF24	Q5T7B8	1368 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	TOPBP1	Q92547	1522 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	RPS6	P62753	249 aa	Known RBP	12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	CROCCP3	Q8IVE0	287 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	SMCO3	A2RU48	225 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	ARIH2	O95376	493 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	OLR1	P78380	273 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	GALNT4	Q8N4A0	578 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	PANX2	Q96RD6	677 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	CD209	Q9NNX6	404 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	GDF11	O95390	407 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	SRGAP2C	P0DJJ0	459 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	GYS1	P13807	737 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	CYP27A1	Q02318	531 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	KCTD6	Q8NC69	237 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	COG1	Q8WTW3	980 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	ZFP42	Q96MM3	310 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	HACD3	Q9P035	362 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	NFU1	Q9UMS0	254 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	VHL	P40337	213 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	ARPC4	P59998	168 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	FAM182B	Q5T319	152 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	SLFN13	Q68D06	897 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	CMTM5	Q96DZ9	223 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	GOLPH3L	Q9H4A5	285 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	C19orf44	Q9H6X5	657 aa		12.01	□□□□□ -0.49
SRSF4-208	ENST00000634348	TEX28	O15482	410 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	HMOX2	P30519	316 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	ADAR	P55265	1226 aa	Known RBP	12	□□□□□ -0.49
SRSF4-208	ENST00000634348	CENPP	Q6IPU0	288 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	APOA5	Q6Q788	366 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	UBASH3B	Q8TF42	649 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	TRIM51	Q9BSJ1	452 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	UBE2T	Q9NPD8	197 aa	Predicted RBP	12	□□□□□ -0.49
SRSF4-208	ENST00000634348	SEL1L	Q9UBV2	794 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	FAM107A	O95990	144 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	ZNF394	Q53GI3	561 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	DPP9	Q86TI2	863 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	MFN1	Q8IWA4	741 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	SUN5	Q8TC36	379 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	DIS3L	Q8TF46	1054 aa	Known RBP	12	□□□□□ -0.49
SRSF4-208	ENST00000634348	COA7	Q96BR5	231 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	EURL	Q9NYK6	297 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	CYTH3	O43739	400 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	TALDO1	P37837	337 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	THOC7	Q6I9Y2	204 aa	Known RBP	12	□□□□□ -0.49
SRSF4-208	ENST00000634348	CCDC81	Q6ZN84	652 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	HSPH1	Q92598	858 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	DSCC1	Q9BVC3	393 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	STK39	Q9UEW8	545 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	MOSPD1	Q9UJG1	213 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	ZMYM6	O95789	1325 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	TRIM66	O15016	1216 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	MAP3K13	O43283	966 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	PSTPIP1	O43586	416 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	ANO4	Q32M45	955 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	TUBA3E	Q6PEY2	450 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	BBS7	Q8IWZ6	715 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	CENPT	Q96BT3	561 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	TSPAN18	Q96SJ8	248 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	MYLK2	Q9H1R3	596 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	KDM4C	Q9H3R0	1056 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	MRC2	Q9UBG0	1479 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	PODXL	O00592	558 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	PHKA1	P46020	1223 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	ZNF568	Q3ZCX4	644 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	PUS3	Q9BZE2	481 aa	Known RBP	12	□□□□□ -0.49
SRSF4-208	ENST00000634348	HDHD2	Q9H0R4	259 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	ZWILCH	Q9H900	591 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	ING3	Q9NXR8	418 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	CCDC59	Q9P031	241 aa	Known RBP	12	□□□□□ -0.49
SRSF4-208	ENST00000634348	CPSF3	Q9UKF6	684 aa	Known RBP	12	□□□□□ -0.49
SRSF4-208	ENST00000634348	KRT1	P04264	644 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	CSTF3	Q12996	717 aa	Known RBP	12	□□□□□ -0.49
SRSF4-208	ENST00000634348	TRIQK	Q629K1	86 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	C11orf57	Q6ZUT1	292 aa	Predicted RBP	12	□□□□□ -0.49
SRSF4-208	ENST00000634348	SNF8	Q96H20	258 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	ZNF577	Q9BSK1	485 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	POLI	Q9UNA4	740 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	PITPNM2	Q9BZ72	1349 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	PAM	P19021	973 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	DYNLL1	P63167	89 aa	Known RBP	12	□□□□□ -0.49
SRSF4-208	ENST00000634348	BBS9	Q3SYG4	887 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	PDZK1	Q5T2W1	519 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	SLFN12	Q8IYM2	578 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	IARS2	Q9NSE4	1012 aa	Known RBP	12	□□□□□ -0.49
SRSF4-208	ENST00000634348	MRPL11	Q9Y3B7	192 aa	Known RBP	12	□□□□□ -0.49
SRSF4-208	ENST00000634348	LMTK3	Q96Q04	1460 aa		12	□□□□□ -0.49
SRSF4-208	ENST00000634348	KDM5B	Q9UGL1	1544 aa		11.99	□□□□□ -0.49
SRSF4-208	ENST00000634348	ATP5J	P18859	108 aa		11.99	□□□□□ -0.49
SRSF4-208	ENST00000634348	PPARG	P37231	505 aa	Predicted RBP	11.99	□□□□□ -0.49
SRSF4-208	ENST00000634348	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.99	□□□□□ -0.49
SRSF4-208	ENST00000634348	KRT39	Q6A163	491 aa		11.99	□□□□□ -0.49
SRSF4-208	ENST00000634348	PDIK1L	Q8N165	341 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms