RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 PRO3102Q9H379 93 aa18.26■□□□□ 0.51
CDC42EP4-209ENST00000630622 PTPRHQ9HD43 1115 aa18.26■□□□□ 0.51
CDC42EP4-209ENST00000630622 CXXC1Q9P0U4 656 aaPredicted RBP18.26■□□□□ 0.51
CDC42EP4-209ENST00000630622 GDAQ9Y2T3 454 aa18.26■□□□□ 0.51
CDC42EP4-209ENST00000630622 ZMYM2Q9UBW7 1377 aa18.26■□□□□ 0.51
CDC42EP4-209ENST00000630622 C9IYK1 514 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 ABLIM1O14639 778 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 N4BP3O15049 544 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 EFCAB14O75071 495 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 ZSCAN20P17040 1043 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 BMP6P22004 513 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 PROZP22891 400 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 WDR5P61964 334 aaKnown RBP18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 FAM189BP81408 668 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 MORC3Q14149 939 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 SHHQ15465 462 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 ZNF658Q5TYW1 1059 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 TWF2Q6IBS0 349 aaKnown RBP18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 SLC39A4Q6P5W5 647 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 ACCSQ96QU6 501 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 TMEM63CQ9P1W3 806 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 TNFSF13BQ9Y275 285 aa18.25■□□□□ 0.51
CDC42EP4-209ENST00000630622 TOM1L1O75674 476 aa18.24■□□□□ 0.51
CDC42EP4-209ENST00000630622 CCDC183Q5T5S1 534 aa18.24■□□□□ 0.51
CDC42EP4-209ENST00000630622 SLC27A1Q6PCB7 646 aa18.24■□□□□ 0.51
CDC42EP4-209ENST00000630622 SLC24A5Q71RS6 500 aa18.24■□□□□ 0.51
CDC42EP4-209ENST00000630622 SMYD4Q8IYR2 804 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP4-209ENST00000630622 CRIPAKQ8N1N5 446 aa18.24■□□□□ 0.51
CDC42EP4-209ENST00000630622 BICD1Q96G01 975 aa18.24■□□□□ 0.51
CDC42EP4-209ENST00000630622 ZBTB45Q96K62 511 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP4-209ENST00000630622 EIF2AQ9BY44 585 aaKnown RBP18.24■□□□□ 0.51
CDC42EP4-209ENST00000630622 C1orf112Q9NSG2 853 aa18.24■□□□□ 0.51
CDC42EP4-209ENST00000630622 FAM105AQ9NUU6 356 aa18.24■□□□□ 0.51
CDC42EP4-209ENST00000630622 EXOC7Q9UPT5 735 aa18.24■□□□□ 0.51
CDC42EP4-209ENST00000630622 A0A0U1RQF3 1178 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 TISP43B9A030 160 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 ANKRD63C9JTQ0 380 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 BIN1O00499 593 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 HNRNPDLO14979 420 aaKnown RBP18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 ATF7P17544 494 aaPredicted RBP18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 LIG4P49917 911 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 DEFB103AP81534 67 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 TMEM132AQ24JP5 1023 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 COBLL1Q53SF7 1204 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 ISM2Q6H9L7 571 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 ECHDC2Q86YB7 292 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 MYOCDQ8IZQ8 938 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 GUF1Q8N442 669 aaKnown RBP18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 TRIML1Q8N9V2 468 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 GTPBP4Q9BZE4 634 aaKnown RBP18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 HAPLN2Q9GZV7 340 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 CDT1Q9H211 546 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 TMEM206Q9H813 350 aa18.23■□□□□ 0.51
CDC42EP4-209ENST00000630622 TGFB1I1O43294 461 aa18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 ZNF623O75123 536 aa18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 NPTXRO95502 500 aa18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 RAB27AP51159 221 aa18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 MCL1Q07820 350 aa18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 KNOP1Q1ED39 458 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 CAVIN1Q6NZI2 390 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 MPZL3Q6UWV2 235 aa18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 ZNF598Q86UK7 904 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 NELFCDQ8IXH7 590 aa18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 SYCP3Q8IZU3 236 aa18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 SMG8Q8ND04 991 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 MTIF3Q9H2K0 278 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 MAPK8IP1Q9UQF2 711 aa18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 PCDHB2Q9Y5E7 798 aa18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 STYXL1Q9Y6J8 313 aa18.22■□□□□ 0.51
CDC42EP4-209ENST00000630622 ZBBXA8MT70 800 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 AMHP03971 560 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 ADSSP30520 456 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 PRCPP42785 496 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 KCNJ6P48051 423 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 SKOR2Q2VWA4 1001 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 DCAF4L1Q3SXM0 396 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 ZNF568Q3ZCX4 644 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 CHRDL2Q6WN34 429 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 MRPL10Q7Z7H8 261 aaKnown RBP18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 RNPC3Q96LT9 517 aaKnown RBP18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 ADPGKQ9BRR6 497 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 KCTD10Q9H3F6 313 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 NXF3Q9H4D5 531 aaKnown RBP18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 ELAC1Q9H777 363 aaKnown RBP18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 ANKFY1Q9P2R3 1169 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 IPPQ9Y573 584 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 SLC4A7Q9Y6M7 1214 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 COL4A6Q14031 1691 aa18.21■□□□□ 0.51
CDC42EP4-209ENST00000630622 A0A0B4J269 797 aa18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 CLDN3O15551 220 aa18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 MCF2P10911 925 aa18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 SKIP12755 728 aa18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 CD44P16070 742 aaKnown RBP18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 NOLC1Q14978 699 aaKnown RBP eCLIP18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 ZBTB33Q86T24 672 aa18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 NPAS4Q8IUM7 802 aa18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 ADSSL1Q8N142 457 aa18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 TOP1MTQ969P6 601 aa18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 SYAP1Q96A49 352 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms