RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 ZMYM2Q9UBW7 1377 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 PLXNA3P51805 1871 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 SFI1A8K8P3 1242 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 ACKR2O00590 384 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 OFD1O75665 1012 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 ERLIN2O94905 339 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 ITGB1P05556 798 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 PRKCBP05771 671 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 RB1P06400 928 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 HSP90AA1P07900 732 aaKnown RBP12.26□□□□□ -0.45
DDX41-219ENST00000629036 IBSPP21815 317 aaPredicted RBP12.26□□□□□ -0.45
DDX41-219ENST00000629036 PEX3P56589 373 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 CACNB1Q02641 598 aaPredicted RBP12.26□□□□□ -0.45
DDX41-219ENST00000629036 RAD51AP2Q09MP3 1159 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 GIT2Q14161 759 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 PPP2R5AQ15172 486 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 FOXD4L6Q3SYB3 417 aaPredicted RBP12.26□□□□□ -0.45
DDX41-219ENST00000629036 NOTUMQ6P988 496 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 FOXD4L3Q6VB84 417 aaPredicted RBP12.26□□□□□ -0.45
DDX41-219ENST00000629036 GPBP1Q86WP2 473 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 LRRC43Q8N309 656 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 COLGALT1Q8NBJ5 622 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 TMEM161BQ8NDZ6 487 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 SPIRE2Q8WWL2 714 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 LARP4BQ92615 738 aaKnown RBP12.26□□□□□ -0.45
DDX41-219ENST00000629036 P2RX5Q93086 422 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 HLA-CQ95604 372 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 DNAJC19Q96DA6 116 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 DRC1Q96MC2 740 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 ZNF396Q96N95 335 aaPredicted RBP12.26□□□□□ -0.45
DDX41-219ENST00000629036 PLVAPQ9BX97 442 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 C2orf40Q9H1Z8 148 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 CXCL16Q9H2A7 254 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 C17orf75Q9HAS0 396 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 PTPRHQ9HD43 1115 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 PRMT7Q9NVM4 692 aaPredicted RBP12.26□□□□□ -0.45
DDX41-219ENST00000629036 LMCD1Q9NZU5 365 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 STK17AQ9UEE5 414 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 LRFN2Q9ULH4 789 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 COG5Q9UP83 839 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 HES2Q9Y543 173 aa12.26□□□□□ -0.45
DDX41-219ENST00000629036 PI4K2BG5E9Z4 385 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 MEFVO15553 781 aaPredicted RBP12.25□□□□□ -0.45
DDX41-219ENST00000629036 HOXA2O43364 376 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 MAPTP10636 758 aaKnown RBP12.25□□□□□ -0.45
DDX41-219ENST00000629036 PLS3P13797 630 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 PROZP22891 400 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 PBX3P40426 434 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 NCKAP1LP55160 1127 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 GPM6BQ13491 265 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 STK38Q15208 465 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 LONRF3Q496Y0 759 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 ATL3Q6DD88 541 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 TMEM173Q86WV6 379 aaPredicted RBP12.25□□□□□ -0.45
DDX41-219ENST00000629036 ZBTB8OSQ8IWT0 167 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 KLHL23Q8NBE8 558 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 SPPL3Q8TCT6 385 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 BCL7CQ8WUZ0 217 aaPredicted RBP12.25□□□□□ -0.45
DDX41-219ENST00000629036 MRPL38Q96DV4 380 aaKnown RBP12.25□□□□□ -0.45
DDX41-219ENST00000629036 CALML4Q96GE6 196 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 CDK5RAP3Q96JB5 506 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 TMEM134Q9H6X4 195 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 TBC1D13Q9NVG8 400 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
DDX41-219ENST00000629036 RCOR1Q9UKL0 485 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 ODF2LQ9ULJ1 636 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 PLAGL2Q9UPG8 496 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 RWDD3Q9Y3V2 267 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 TSC2P49815 1807 aa12.25□□□□□ -0.45
DDX41-219ENST00000629036 FRMD3A2A2Y4 597 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 MYMKA6NI61 221 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 CUTAO60888 179 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 PPP1R37O75864 691 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 EFEMP2O95967 443 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 SSBP05455 408 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX41-219ENST00000629036 SKIP12755 728 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 EFNA5P52803 228 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 NHLH1Q02575 133 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 MAPK6Q16659 721 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 SLC27A1Q6PCB7 646 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 SLC39A11Q8N1S5 342 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 RNF169Q8NCN4 708 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 DEPTORQ8TB45 409 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 IFT74Q96LB3 600 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 ZFP42Q96MM3 310 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 ACO2Q99798 780 aaKnown RBP12.24□□□□□ -0.45
DDX41-219ENST00000629036 C11orf84Q9BUA3 381 aaPredicted RBP12.24□□□□□ -0.45
DDX41-219ENST00000629036 VN1R3Q9BXE9 311 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 HAPLN2Q9GZV7 340 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 NRDE2Q9H7Z3 1164 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 RSAD1Q9HA92 442 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 MIOSQ9NXC5 875 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 PCDHA7Q9UN72 937 aa12.24□□□□□ -0.45
DDX41-219ENST00000629036 MTCL1Q9Y4B5 1905 aaKnown RBP12.24□□□□□ -0.45
DDX41-219ENST00000629036 PRR33A8MZF0 331 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 FSCN2O14926 492 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 SLC16A4O15374 487 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 DDHD2O94830 711 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 NPTXRO95502 500 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 IRS1P35568 1242 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms