RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 DDX3XO00571 662 aaKnown RBP eCLIP8.09□□□□□ -1.117e-20■■□□□ 13.2
PKP4-217ENST00000628904 ERLIN2O94905 339 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 FAM153BP0C7A2 387 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 IREB2P48200 963 aaKnown RBP8.09□□□□□ -1.11
PKP4-217ENST00000628904 MARCKSL1P49006 195 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 KRT71Q3SY84 523 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 FAM153CQ494X1 144 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 PRAMEF19Q5SWL8 479 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 INTS8Q75QN2 995 aaKnown RBP8.09□□□□□ -1.11
PKP4-217ENST00000628904 TRAPPC11Q7Z392 1133 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 IFT20Q8IY31 132 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 FUT8Q9BYC5 575 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 TRIM7Q9C029 511 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 TRIM6Q9C030 488 aaPredicted RBP8.09□□□□□ -1.11
PKP4-217ENST00000628904 CNOT8Q9UFF9 292 aaKnown RBP8.09□□□□□ -1.11
PKP4-217ENST00000628904 FAM153AQ9UHL3 310 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 AGO2Q9UKV8 859 aaKnown RBP8.09□□□□□ -1.11
PKP4-217ENST00000628904 TBX20Q9UMR3 447 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 PRRC2BQ5JSZ5 2229 aaKnown RBP8.09□□□□□ -1.11
PKP4-217ENST00000628904 ZNF536O15090 1300 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 CYP3A7-CYP3A51PA0A087WV96 503 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 GRID2IPA4D2P6 1211 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 RAD51CO43502 376 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 VTNP04004 478 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 ZNF286BP0CG31 522 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 NEFHP12036 1026 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 NSFP46459 744 aaKnown RBP8.09□□□□□ -1.11
PKP4-217ENST00000628904 IFNAR2P48551 515 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 NLRP11P59045 1033 aaKnown RBP8.09□□□□□ -1.11
PKP4-217ENST00000628904 EMC2Q15006 297 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 EDRF1Q3B7T1 1238 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 HSDL1Q3SXM5 330 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 PRUNE1Q86TP1 453 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 DAW1Q8N136 415 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 ATG4AQ8WYN0 398 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 RIT2Q99578 217 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 NUCKS1Q9H1E3 243 aaKnown RBP8.09□□□□□ -1.11
PKP4-217ENST00000628904 GPRC5DQ9NZD1 345 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 STIM2Q9P246 746 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 PCSK1NQ9UHG2 260 aa8.09□□□□□ -1.11
PKP4-217ENST00000628904 NOC2LQ9Y3T9 749 aaKnown RBP8.09□□□□□ -1.11
PKP4-217ENST00000628904 DDX60Q8IY21 1712 aaKnown RBP8.09□□□□□ -1.11
PKP4-217ENST00000628904 BRCA2P51587 3418 aa8.09□□□□□ -1.12
PKP4-217ENST00000628904 CHD4Q14839 1912 aa8.09□□□□□ -1.12
PKP4-217ENST00000628904 GOLGA8MH3BSY2 632 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 SART1O43290 800 aaKnown RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 PIAS1O75925 651 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 MAPK4P31152 587 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 KCNJ6P48051 423 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 NFX1Q12986 1120 aaKnown RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 UAP1Q16222 522 aaPredicted RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 CCDC38Q502W7 563 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 SEL1L2Q5TEA6 688 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 SV2AQ7L0J3 742 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 USP37Q86T82 979 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 FAM76AQ8TAV0 307 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 AFAP1L1Q8TED9 768 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 LRRN4Q8WUT4 740 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 PRPF31Q8WWY3 499 aaKnown RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 NUP85Q9BW27 656 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 TMEM117Q9H0C3 514 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 LMNB1P20700 586 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 MFAP3P55082 362 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 TGFB2P61812 414 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 SP2Q02086 613 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 PDCLQ13371 301 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 MCTP2Q6DN12 878 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 APOBEC3FQ8IUX4 373 aaKnown RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 THOC1Q96FV9 657 aaKnown RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 ZWILCHQ9H900 591 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 KCNK9Q9NPC2 374 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 CYP26B1Q9NR63 512 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 UTP11Q9Y3A2 253 aaKnown RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 F8VZ95 297 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 MYO1FO00160 1098 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 ACSL3O95573 720 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 RAP1GAPP47736 663 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 LACTBP83111 547 aaPredicted RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 ORC2Q13416 577 aaPredicted RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 SMTNL2Q2TAL5 461 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 ZNF568Q3ZCX4 644 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 BEND6Q5SZJ8 279 aaPredicted RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 HGSNATQ68CP4 663 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 KRT39Q6A163 491 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 CYP4F22Q6NT55 531 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 RSRC2Q7L4I2 434 aaKnown RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 KIFAP3Q92845 792 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 LENG1Q96BZ8 264 aaPredicted RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 OPTNQ96CV9 577 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 TTYH3Q9C0H2 523 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 NRBP2Q9NSY0 501 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 MORC2Q9Y6X9 1032 aaPredicted RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.08□□□□□ -1.12
PKP4-217ENST00000628904 MYH10P35580 1976 aa8.08□□□□□ -1.12
PKP4-217ENST00000628904 SPDYE16A6NNV3 312 aaPredicted RBP8.07□□□□□ -1.12
PKP4-217ENST00000628904 PGRMC1O00264 195 aaKnown RBP8.07□□□□□ -1.12
PKP4-217ENST00000628904 KIF4AO95239 1232 aa8.07□□□□□ -1.12
PKP4-217ENST00000628904 CYP3A7P24462 503 aa8.07□□□□□ -1.12
PKP4-217ENST00000628904 TNFSF9P41273 254 aa8.07□□□□□ -1.12
PKP4-217ENST00000628904 PTGER2P43116 358 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms