RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 SYCP3Q8IZU3 236 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 ZNF507Q8TCN5 953 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 TSPYL2Q9H2G4 693 aaPredicted RBP20.66■□□□□ 0.9
MECP2-216ENST00000627864 PDZD7Q9H5P4 517 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 EXOC7Q9UPT5 735 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 GBF1Q92538 1859 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.65■□□□□ 0.9
MECP2-216ENST00000627864 BMP8BP34820 402 aa20.65■□□□□ 0.9
MECP2-216ENST00000627864 WDR5P61964 334 aaKnown RBP20.65■□□□□ 0.9
MECP2-216ENST00000627864 ZNF658Q5TYW1 1059 aaPredicted RBP20.65■□□□□ 0.9
MECP2-216ENST00000627864 ZPBP2Q6X784 338 aa20.65■□□□□ 0.9
MECP2-216ENST00000627864 SLC24A5Q71RS6 500 aa20.65■□□□□ 0.9
MECP2-216ENST00000627864 NELFCDQ8IXH7 590 aa20.65■□□□□ 0.9
MECP2-216ENST00000627864 SCFD1Q8WVM8 642 aa20.65■□□□□ 0.9
MECP2-216ENST00000627864 CCDC51Q96ER9 411 aa20.65■□□□□ 0.9
MECP2-216ENST00000627864 ZBTB45Q96K62 511 aaPredicted RBP20.65■□□□□ 0.9
MECP2-216ENST00000627864 TCHPQ9BT92 498 aa20.65■□□□□ 0.9
MECP2-216ENST00000627864 MTIF3Q9H2K0 278 aaKnown RBP20.65■□□□□ 0.9
MECP2-216ENST00000627864 IKZF4Q9H2S9 585 aa20.65■□□□□ 0.9
MECP2-216ENST00000627864 C1orf112Q9NSG2 853 aa20.65■□□□□ 0.9
MECP2-216ENST00000627864 CXXC1Q9P0U4 656 aaPredicted RBP20.65■□□□□ 0.9
MECP2-216ENST00000627864 TNFSF13BQ9Y275 285 aa20.65■□□□□ 0.9
MECP2-216ENST00000627864 UBE4BO95155 1302 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 C9IYK1 514 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 HNRNPDLO14979 420 aaKnown RBP20.64■□□□□ 0.89
MECP2-216ENST00000627864 NPTXRO95502 500 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 AMHP03971 560 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 MATR3P43243 847 aaKnown RBP eCLIP20.64■□□□□ 0.89
MECP2-216ENST00000627864 UBXN11Q5T124 520 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 CCDC183Q5T5S1 534 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 SLC27A1Q6PCB7 646 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 CHRDL2Q6WN34 429 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 ZBTB33Q86T24 672 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 SMYD4Q8IYR2 804 aaPredicted RBP20.64■□□□□ 0.89
MECP2-216ENST00000627864 MYOCDQ8IZQ8 938 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 RNPC3Q96LT9 517 aaKnown RBP20.64■□□□□ 0.89
MECP2-216ENST00000627864 ADPGKQ9BRR6 497 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 EIF2AQ9BY44 585 aaKnown RBP20.64■□□□□ 0.89
MECP2-216ENST00000627864 TMEM206Q9H813 350 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 TMEM63CQ9P1W3 806 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 MAPK8IP1Q9UQF2 711 aa20.64■□□□□ 0.89
MECP2-216ENST00000627864 FNDC1Q4ZHG4 1894 aaPredicted RBP20.63■□□□□ 0.89
MECP2-216ENST00000627864 ANKRD63C9JTQ0 380 aa20.63■□□□□ 0.89
MECP2-216ENST00000627864 PIGRP01833 764 aa20.63■□□□□ 0.89
MECP2-216ENST00000627864 HOXD13P35453 343 aa20.63■□□□□ 0.89
MECP2-216ENST00000627864 DEFB103AP81534 67 aa20.63■□□□□ 0.89
MECP2-216ENST00000627864 MORC3Q14149 939 aa20.63■□□□□ 0.89
MECP2-216ENST00000627864 KLHL40Q2TBA0 621 aa20.63■□□□□ 0.89
MECP2-216ENST00000627864 SKOR2Q2VWA4 1001 aaPredicted RBP20.63■□□□□ 0.89
MECP2-216ENST00000627864 CAVIN1Q6NZI2 390 aaKnown RBP20.63■□□□□ 0.89
MECP2-216ENST00000627864 SYAP1Q96A49 352 aaPredicted RBP20.63■□□□□ 0.89
MECP2-216ENST00000627864 GTPBP4Q9BZE4 634 aaKnown RBP20.63■□□□□ 0.89
MECP2-216ENST00000627864 TRIM6Q9C030 488 aaPredicted RBP20.63■□□□□ 0.89
MECP2-216ENST00000627864 FAM105AQ9NUU6 356 aa20.63■□□□□ 0.89
MECP2-216ENST00000627864 ANKFY1Q9P2R3 1169 aa20.63■□□□□ 0.89
MECP2-216ENST00000627864 PCDHB2Q9Y5E7 798 aa20.63■□□□□ 0.89
MECP2-216ENST00000627864 SLC4A7Q9Y6M7 1214 aa20.63■□□□□ 0.89
MECP2-216ENST00000627864 A0A0U1RQF3 1178 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 TISP43B9A030 160 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 TOM1L1O75674 476 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 UPP2O95045 317 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 KIF20AO95235 890 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 HARSP12081 509 aaKnown RBP20.62■□□□□ 0.89
MECP2-216ENST00000627864 RAB27AP51159 221 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 FAM189BP81408 668 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 BMT2Q1RMZ1 405 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 ZNF568Q3ZCX4 644 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 SLC39A4Q6P5W5 647 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 MPZL3Q6UWV2 235 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 APBB1IPQ7Z5R6 666 aaPredicted RBP20.62■□□□□ 0.89
MECP2-216ENST00000627864 ECHDC2Q86YB7 292 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 RNF169Q8NCN4 708 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 TRAIPQ9BWF2 469 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 PTPRHQ9HD43 1115 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 LRFN2Q9ULH4 789 aa20.62■□□□□ 0.89
MECP2-216ENST00000627864 TDRD15B5MCY1 1934 aaKnown RBP20.62■□□□□ 0.89
MECP2-216ENST00000627864 CLDN3O15551 220 aa20.61■□□□□ 0.89
MECP2-216ENST00000627864 SKIP12755 728 aa20.61■□□□□ 0.89
MECP2-216ENST00000627864 PROZP22891 400 aa20.61■□□□□ 0.89
MECP2-216ENST00000627864 PRCPP42785 496 aa20.61■□□□□ 0.89
MECP2-216ENST00000627864 KNOP1Q1ED39 458 aaKnown RBP20.61■□□□□ 0.89
MECP2-216ENST00000627864 DCAF4L1Q3SXM0 396 aa20.61■□□□□ 0.89
MECP2-216ENST00000627864 RASIP1Q5U651 963 aa20.61■□□□□ 0.89
MECP2-216ENST00000627864 GUF1Q8N442 669 aaKnown RBP20.61■□□□□ 0.89
MECP2-216ENST00000627864 TRIML1Q8N9V2 468 aa20.61■□□□□ 0.89
MECP2-216ENST00000627864 GBP3Q9H0R5 595 aa20.61■□□□□ 0.89
MECP2-216ENST00000627864 CDT1Q9H211 546 aa20.61■□□□□ 0.89
MECP2-216ENST00000627864 PCDHB7Q9Y5E2 793 aa20.61■□□□□ 0.89
MECP2-216ENST00000627864 ZMYM2Q9UBW7 1377 aa20.6■□□□□ 0.89
MECP2-216ENST00000627864 ABLIM1O14639 778 aa20.6■□□□□ 0.89
MECP2-216ENST00000627864 ZNF623O75123 536 aa20.6■□□□□ 0.89
MECP2-216ENST00000627864 STAG3L1P0CL83 205 aa20.6■□□□□ 0.89
MECP2-216ENST00000627864 MCF2P10911 925 aa20.6■□□□□ 0.89
MECP2-216ENST00000627864 BMP6P22004 513 aa20.6■□□□□ 0.89
MECP2-216ENST00000627864 SLFN12LQ6IEE8 588 aa20.6■□□□□ 0.89
MECP2-216ENST00000627864 FAM117BQ6P1L5 589 aa20.6■□□□□ 0.89
MECP2-216ENST00000627864 TMCO2Q7Z6W1 182 aaPredicted RBP20.6■□□□□ 0.89
MECP2-216ENST00000627864 SMG8Q8ND04 991 aaKnown RBP20.6■□□□□ 0.89
MECP2-216ENST00000627864 APOL6Q9BWW8 343 aa20.6■□□□□ 0.89
MECP2-216ENST00000627864 HAPLN2Q9GZV7 340 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms