RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 B4GALT5O43286 388 aa24.66■■□□□ 1.54
SF1-220ENST00000626028 IRS1P35568 1242 aa24.66■■□□□ 1.54
SF1-220ENST00000626028 KCNQ1P51787 676 aa24.66■■□□□ 1.54
SF1-220ENST00000626028 DMP1Q13316 513 aaPredicted RBP24.66■■□□□ 1.54
SF1-220ENST00000626028 KCNK18Q7Z418 384 aa24.66■■□□□ 1.54
SF1-220ENST00000626028 APBB1IPQ7Z5R6 666 aaPredicted RBP24.66■■□□□ 1.54
SF1-220ENST00000626028 MICAL1Q8TDZ2 1067 aa24.66■■□□□ 1.54
SF1-220ENST00000626028 PNMA5Q96PV4 448 aa24.66■■□□□ 1.54
SF1-220ENST00000626028 NTPCRQ9BSD7 190 aaKnown RBP24.66■■□□□ 1.54
SF1-220ENST00000626028 CLDND1Q9NY35 253 aa24.66■■□□□ 1.54
SF1-220ENST00000626028 MTMR6Q9Y217 621 aa24.66■■□□□ 1.54
SF1-220ENST00000626028 MUC3AQ02505 3323 aa24.65■■□□□ 1.54
SF1-220ENST00000626028 CITO14578 2027 aa24.65■■□□□ 1.54
SF1-220ENST00000626028 ZC3H11AO75152 810 aaKnown RBP eCLIP24.65■■□□□ 1.54
SF1-220ENST00000626028 PRKCBP05771 671 aa24.65■■□□□ 1.54
SF1-220ENST00000626028 ADAM15Q13444 863 aa24.65■■□□□ 1.54
SF1-220ENST00000626028 LONRF3Q496Y0 759 aa24.65■■□□□ 1.54
SF1-220ENST00000626028 FAM193BQ96PV7 902 aaPredicted RBP24.65■■□□□ 1.54
SF1-220ENST00000626028 ADPGKQ9BRR6 497 aa24.65■■□□□ 1.54
SF1-220ENST00000626028 CCSER1Q9C0I3 900 aa24.65■■□□□ 1.54
SF1-220ENST00000626028 TMEM134Q9H6X4 195 aa24.65■■□□□ 1.54
SF1-220ENST00000626028 ARL5CA6NH57 179 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 K7ERI5 159 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 HIP1RO75146 1068 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 GALTP07902 379 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 SCP2P22307 547 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 SLC12A3P55017 1021 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 ERVFC1P60507 584 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 GIT2Q14161 759 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 PTPAQ15257 358 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 ZRSR1Q15695 479 aaKnown RBP24.64■■□□□ 1.54
SF1-220ENST00000626028 DAW1Q8N136 415 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 UHRF1Q96T88 793 aaPredicted RBP24.64■■□□□ 1.54
SF1-220ENST00000626028 TCF25Q9BQ70 676 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 RUSC1Q9BVN2 902 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 TLE6Q9H808 572 aa24.64■■□□□ 1.54
SF1-220ENST00000626028 ALDH2P05091 517 aa24.63■■□□□ 1.53
SF1-220ENST00000626028 LTBRP36941 435 aa24.63■■□□□ 1.53
SF1-220ENST00000626028 PBX3P40426 434 aa24.63■■□□□ 1.53
SF1-220ENST00000626028 NPTX2P47972 431 aa24.63■■□□□ 1.53
SF1-220ENST00000626028 DDX53Q86TM3 631 aaKnown RBP24.63■■□□□ 1.53
SF1-220ENST00000626028 IGSF21Q96ID5 467 aa24.63■■□□□ 1.53
SF1-220ENST00000626028 NXF3Q9H4D5 531 aaKnown RBP24.63■■□□□ 1.53
SF1-220ENST00000626028 PDZD7Q9H5P4 517 aa24.63■■□□□ 1.53
SF1-220ENST00000626028 ENTPD7Q9NQZ7 604 aa24.63■■□□□ 1.53
SF1-220ENST00000626028 ARHGAP28Q9P2N2 729 aa24.63■■□□□ 1.53
SF1-220ENST00000626028 NPTXRO95502 500 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 HSP90AA1P07900 732 aaKnown RBP24.62■■□□□ 1.53
SF1-220ENST00000626028 PLA2G4BP0C869 781 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 PEX3P56589 373 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 MAPK7Q13164 816 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 SMC1AQ14683 1233 aaKnown RBP24.62■■□□□ 1.53
SF1-220ENST00000626028 DCAF4L1Q3SXM0 396 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 TMC7Q7Z402 723 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 ADGRD2Q7Z7M1 963 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 ZNF280BQ86YH2 543 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.62■■□□□ 1.53
SF1-220ENST00000626028 SPIRE2Q8WWL2 714 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 KCNN1Q92952 543 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 ODF2LQ9ULJ1 636 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 HES2Q9Y543 173 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 SRPRBQ9Y5M8 271 aaKnown RBP24.62■■□□□ 1.53
SF1-220ENST00000626028 IRAK3Q9Y616 596 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 CLIC4Q9Y696 253 aa24.62■■□□□ 1.53
SF1-220ENST00000626028 GRXCR2A6NFK2 248 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 CCDC169A6NNP5 214 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 H0YCG3 227 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 TNFRSF10AO00220 468 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 NR1I2O75469 434 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 SRGAP2BP0DMP2 458 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 MLH1P40692 756 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 NRIP1P48552 1158 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 SMTNP53814 917 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 DSC1Q08554 894 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 DUSP6Q16828 381 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 TMEM132AQ24JP5 1023 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 PTCRAQ6ISU1 281 aaPredicted RBP24.61■■□□□ 1.53
SF1-220ENST00000626028 TMEM184AQ6ZMB5 413 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 MRPL43Q8N983 215 aaKnown RBP24.61■■□□□ 1.53
SF1-220ENST00000626028 GAD1Q99259 594 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 RNF39Q9H2S5 420 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 KMT5AQ9NQR1 393 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 LARSQ9P2J5 1176 aaKnown RBP24.61■■□□□ 1.53
SF1-220ENST00000626028 DNAJB4Q9UDY4 337 aa24.61■■□□□ 1.53
SF1-220ENST00000626028 DDHD2O94830 711 aa24.6■■□□□ 1.53
SF1-220ENST00000626028 SSBP05455 408 aaKnown RBP eCLIP24.6■■□□□ 1.53
SF1-220ENST00000626028 PLS3P13797 630 aa24.6■■□□□ 1.53
SF1-220ENST00000626028 SLC11A1P49279 550 aa24.6■■□□□ 1.53
SF1-220ENST00000626028 EP400NLQ6ZTU2 488 aa24.6■■□□□ 1.53
SF1-220ENST00000626028 COLGALT2Q8IYK4 626 aa24.6■■□□□ 1.53
SF1-220ENST00000626028 IGFLR1Q9H665 355 aa24.6■■□□□ 1.53
SF1-220ENST00000626028 TNFSF13BQ9Y275 285 aa24.6■■□□□ 1.53
SF1-220ENST00000626028 FAN1Q9Y2M0 1017 aa24.6■■□□□ 1.53
SF1-220ENST00000626028 H3BQ06 376 aaPredicted RBP24.59■■□□□ 1.53
SF1-220ENST00000626028 POMCP01189 267 aa24.59■■□□□ 1.53
SF1-220ENST00000626028 NDUFV1P49821 464 aa24.59■■□□□ 1.53
SF1-220ENST00000626028 AFF1P51825 1210 aaKnown RBP24.59■■□□□ 1.53
SF1-220ENST00000626028 GRIK3Q13003 919 aa24.59■■□□□ 1.53
SF1-220ENST00000626028 SLC39A14Q15043 492 aa24.59■■□□□ 1.53
SF1-220ENST00000626028 ATF7IP2Q5U623 682 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms