RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 SLURP2P0DP57 97 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 ATP2A2P16615 1042 aaKnown RBP9.83□□□□□ -0.84
USB1-216ENST00000624720 ATF7P17544 494 aaPredicted RBP9.83□□□□□ -0.84
USB1-216ENST00000624720 SERPINB4P48594 390 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 ACADVLP49748 655 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 VSNL1P62760 191 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 CTC1Q2NKJ3 1217 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 MTERF2Q49AM1 385 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 CDONQ4KMG0 1287 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 RUFY4Q6ZNE9 571 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 P3H4Q92791 437 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 BTAF1O14981 1849 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 hCG_1984214I3L0E3 225 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 OLFM2O95897 454 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 CYP2D6P10635 497 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 GGCXP38435 758 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 CBX5P45973 191 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 KPNA1P52294 538 aaPredicted RBP9.83□□□□□ -0.84
USB1-216ENST00000624720 DNM1Q05193 864 aaKnown RBP9.83□□□□□ -0.84
USB1-216ENST00000624720 PDCLQ13371 301 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 UBE4AQ14139 1066 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 NFE2L1Q14494 772 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 SYCP2LQ5T4T6 812 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 LONP2Q86WA8 852 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 GATAD2AQ86YP4 633 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 TREML1Q86YW5 311 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 HACE1Q8IYU2 909 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 NATD1Q8N6N6 113 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 JDP2Q8WYK2 163 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 CALN1Q9BXU9 219 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 FAM117AQ9C073 453 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 ZSWIM4Q9H7M6 989 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 C12orf10Q9HB07 376 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 HPCAL4Q9UM19 191 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 SNX9Q9Y5X1 595 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 TACC3Q9Y6A5 838 aa9.83□□□□□ -0.84
USB1-216ENST00000624720 N4BP2Q86UW6 1770 aaPredicted RBP9.82□□□□□ -0.84
USB1-216ENST00000624720 KLF18A0A0U1RQI7 1052 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 KRBA1A5PL33 1030 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 ANKRD34BA5PLL1 514 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 G3V3G9 751 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 FBP2O00757 339 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 NVLO15381 856 aaKnown RBP9.82□□□□□ -0.84
USB1-216ENST00000624720 STX6O43752 255 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 CBFA2T3O75081 653 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 CFL1P23528 166 aaKnown RBP9.82□□□□□ -0.84
USB1-216ENST00000624720 SKOR1P84550 965 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 PTGISQ16647 500 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 CNPY1Q3B7I2 92 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 ANO6Q4KMQ2 910 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 LACTB2Q53H82 288 aaPredicted RBP9.82□□□□□ -0.84
USB1-216ENST00000624720 DCAF8Q5TAQ9 597 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 MILR1Q7Z6M3 343 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 SLC38A6Q8IZM9 456 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 CADM3Q8N126 398 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 CRACR2BQ8N4Y2 399 aaPredicted RBP9.82□□□□□ -0.84
USB1-216ENST00000624720 KIFC2Q96AC6 838 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 STRBPQ96SI9 672 aaKnown RBP9.82□□□□□ -0.84
USB1-216ENST00000624720 HEPHQ9BQS7 1158 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 TUT1Q9H6E5 874 aaKnown RBP9.82□□□□□ -0.84
USB1-216ENST00000624720 KCNQ5Q9NR82 932 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 FARSBQ9NSD9 589 aaKnown RBP9.82□□□□□ -0.84
USB1-216ENST00000624720 SEPT11Q9NVA2 429 aaKnown RBP9.82□□□□□ -0.84
USB1-216ENST00000624720 THAP1Q9NVV9 213 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 ZBTB21Q9ULJ3 1066 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 SNX5Q9Y5X3 404 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 NEDD4P46934 1319 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 MAGEA13PA6NCF6 341 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 GOLGA8BA8MQT2 603 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 EXTL3O43909 919 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 COL6A2P12110 1019 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 HMOX2P30519 316 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 MTHFRP42898 656 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 TTF1Q15361 905 aaPredicted RBP9.82□□□□□ -0.84
USB1-216ENST00000624720 IL23RQ5VWK5 629 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 BTN2A1Q7KYR7 527 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 CYB5R4Q7L1T6 521 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 FASTKD5Q7L8L6 764 aaKnown RBP9.82□□□□□ -0.84
USB1-216ENST00000624720 SLC51BQ86UW2 128 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 IFNLR1Q8IU57 520 aaPredicted RBP9.82□□□□□ -0.84
USB1-216ENST00000624720 RHOT2Q8IXI1 618 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 IFNL3Q8IZI9 196 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 CYP4X1Q8N118 509 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 ZNF384Q8TF68 577 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 NXPE3Q969Y0 559 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 FAIMQ9NVQ4 179 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 PLAAQ9Y263 795 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 RREB1Q92766 1687 aa9.82□□□□□ -0.84
USB1-216ENST00000624720 POLRMTO00411 1230 aaKnown RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 ASMTLO95671 621 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 GRAPQ13588 217 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 EAPPQ56P03 285 aaPredicted RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 LDLRAD1Q5T700 205 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 SND1Q7KZF4 910 aaKnown RBP eCLIP9.81□□□□□ -0.84
USB1-216ENST00000624720 MAEAQ7L5Y9 396 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 DHX32Q7L7V1 743 aaKnown RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 GRAPLQ8TC17 118 aaPredicted RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 AIFM3Q96NN9 605 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 SMARCAD1Q9H4L7 1026 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms