RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 TRIM49CP0CI26 452 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 RNASE9P60153 205 aaKnown RBP6.78□□□□□ -1.32
ERCC6-209ENST00000623073 TFCP2Q12800 502 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 ALX1Q15699 326 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 RUNDC3AQ59EK9 446 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 TTC33Q6PID6 262 aaPredicted RBP6.78□□□□□ -1.32
ERCC6-209ENST00000623073 FOXR2Q6PJQ5 311 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 SGMS1Q86VZ5 419 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.78□□□□□ -1.32
ERCC6-209ENST00000623073 MYCT1Q8N699 235 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 PNPT1Q8TCS8 783 aaKnown RBP6.78□□□□□ -1.32
ERCC6-209ENST00000623073 SLC26A7Q8TE54 656 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 CDHR1Q96JP9 859 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 ADD3Q9UEY8 706 aaKnown RBP6.78□□□□□ -1.32
ERCC6-209ENST00000623073 PCDHA12Q9UN75 941 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 A2ML1A8K2U0 1454 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 TCP11X1B4DZS4 312 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 ZPR1O75312 459 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 ACAT1P24752 427 aaKnown RBP6.78□□□□□ -1.32
ERCC6-209ENST00000623073 OCRLQ01968 901 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 GCKRQ14397 625 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 FAM83BQ5T0W9 1011 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 TOM1L2Q6ZVM7 507 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 ARMCX6Q7L4S7 300 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 EGFL6Q8IUX8 553 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 RMND5BQ96G75 393 aaPredicted RBP6.78□□□□□ -1.32
ERCC6-209ENST00000623073 PCDHA4Q9UN74 947 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 MBD5Q9P267 1494 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 MTSS1O43312 755 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 CHN1P15882 459 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 RAD23AP54725 363 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 NR1I3Q14994 352 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 MPRIPQ6WCQ1 1025 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 FKBP9P1Q75LS8 142 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 ZNF554Q86TJ5 538 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 DNAJC7Q99615 494 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 DNAJB4Q9UDY4 337 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 THOC5Q13769 683 aaKnown RBP6.78□□□□□ -1.32
ERCC6-209ENST00000623073 P3H1Q32P28 736 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 FAM173BQ6P4H8 233 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 DGKHQ86XP1 1220 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 USP38Q8NB14 1042 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 RBBP8Q99708 897 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 CCDC90BQ9GZT6 254 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 PALD1Q9ULE6 856 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 PHF8Q9UPP1 1060 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 TSHRP16473 764 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 PEX5P50542 639 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 SLFN12LQ6IEE8 588 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 RGS9BPQ6ZS82 235 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 PHACTR3Q96KR7 559 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 PRRG3Q9BZD7 231 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 CCSER1Q9C0I3 900 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 USP44Q9H0E7 712 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 TMEM245Q9H330 911 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 ARHGEF10LQ9HCE6 1279 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 VPS45Q9NRW7 570 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 WDR35Q9P2L0 1181 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 TNPO2O14787 897 aaKnown RBP6.78□□□□□ -1.32
ERCC6-209ENST00000623073 UFL1O94874 794 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 USP11P51784 963 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 POLA2Q14181 598 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 LRRC36Q1X8D7 754 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 CYP4F22Q6NT55 531 aa6.78□□□□□ -1.32
ERCC6-209ENST00000623073 DIS3LQ8TF46 1054 aaKnown RBP6.78□□□□□ -1.32
ERCC6-209ENST00000623073 PRR23D1E9PI22 279 aaPredicted RBP6.77□□□□□ -1.32
ERCC6-209ENST00000623073 PRR23D2P0DMB1 279 aaPredicted RBP6.77□□□□□ -1.32
ERCC6-209ENST00000623073 ABCB4P21439 1286 aa6.77□□□□□ -1.32
ERCC6-209ENST00000623073 MXI1P50539 228 aa6.77□□□□□ -1.32
ERCC6-209ENST00000623073 EIF4A2Q14240 407 aaKnown RBP6.77□□□□□ -1.32
ERCC6-209ENST00000623073 DNAJC24Q6P3W2 148 aa6.77□□□□□ -1.32
ERCC6-209ENST00000623073 PACS2Q86VP3 889 aa6.77□□□□□ -1.32
ERCC6-209ENST00000623073 NACC1Q96RE7 527 aa6.77□□□□□ -1.32
ERCC6-209ENST00000623073 CDCA7Q9BWT1 371 aaPredicted RBP6.77□□□□□ -1.32
ERCC6-209ENST00000623073 KCNF1Q9H3M0 494 aa6.77□□□□□ -1.32
ERCC6-209ENST00000623073 YTHDC2Q9H6S0 1430 aaKnown RBP6.77□□□□□ -1.32
ERCC6-209ENST00000623073 AK9Q5TCS8 1911 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 THRAP10827 490 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 ATP4AP20648 1035 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 ATP2B4P23634 1241 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 ARL4AP40617 200 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 LONP2Q86WA8 852 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 CDKL3Q8IVW4 592 aaPredicted RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 LEMD2Q8NC56 503 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 LENG1Q96BZ8 264 aaPredicted RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 PAGE5Q96GU1 130 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 FAM227BQ96M60 508 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 LDHBP07195 334 aaKnown RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 AP3B2Q13367 1082 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 PPP6R3Q5H9R7 873 aaPredicted RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 SPDYAQ5MJ70 313 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 FNIP1Q8TF40 1166 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 LRRC59Q96AG4 307 aaKnown RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 TSPAN17Q96FV3 270 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 RPAP3Q9H6T3 665 aaPredicted RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 NCOA5Q9HCD5 579 aaKnown RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 PHF11Q9UIL8 331 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 HOXB8P17481 243 aaPredicted RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 IL13P35225 146 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 ATXN3P54252 364 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms