RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 CCDC73Q6ZRK6 1079 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 LRRC55Q6ZSA7 311 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 MRPL10Q7Z7H8 261 aaKnown RBP15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 SMG8Q8ND04 991 aaKnown RBP15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 KCNG4Q8TDN1 519 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 ZNF558Q96NG5 402 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 FAM193BQ96PV7 902 aaPredicted RBP15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 REEP2Q9BRK0 252 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 PANK2Q9BZ23 570 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 CCDC113Q9H0I3 377 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 GBP3Q9H0R5 595 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 LMAN2LQ9H0V9 348 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 CWH43Q9H720 699 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 PARP2Q9UGN5 583 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 PLAGL2Q9UPG8 496 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 USP20Q9Y2K6 914 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 RBM19Q9Y4C8 960 aaKnown RBP15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 HES2Q9Y543 173 aa15.39■□□□□ 0.05
PCDHGC3-208ENST00000622836 EYSQ5T1H1 3165 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 OFD1O75665 1012 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 BRD1O95696 1058 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 ITGB1P05556 798 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 PPM1AP35813 382 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 ALDH7A1P49419 539 aaKnown RBP15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 STRN3Q13033 797 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 ARSHQ5FYA8 562 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 KCNT2Q6UVM3 1135 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 AGMOQ6ZNB7 445 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 APBB1IPQ7Z5R6 666 aaPredicted RBP15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 MYCT1Q8N699 235 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 PDILTQ8N807 584 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 LRRC15Q8TF66 581 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 NXF3Q9H4D5 531 aaKnown RBP15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 PDZD7Q9H5P4 517 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 KANSL3Q9P2N6 904 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 ODF2LQ9ULJ1 636 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 KIAA1671Q9BY89 1806 aa15.38■□□□□ 0.05
PCDHGC3-208ENST00000622836 TTLL13PA6NNM8 815 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 H0YCG3 227 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 CUTAO60888 179 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 FGF18O76093 207 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 POMCP01189 267 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 AKAP5P24588 427 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 PBX3P40426 434 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 MLH1P40692 756 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 KRT17Q04695 432 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 ATF7IP2Q5U623 682 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 SV2BQ7L1I2 683 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 SPPL3Q8TCT6 385 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 MICAL1Q8TDZ2 1067 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 POF1BQ8WVV4 589 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 SPIRE2Q8WWL2 714 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 MRPL4Q9BYD3 311 aaKnown RBP15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 TMEM134Q9H6X4 195 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 PARVGQ9HBI0 331 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 TBC1D13Q9NVG8 400 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 ARHGAP28Q9P2N2 729 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 PUF60Q9UHX1 559 aaKnown RBP15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 ATP6V1DQ9Y5K8 247 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 PRUNE2Q8WUY3 3088 aa15.37■□□□□ 0.05
PCDHGC3-208ENST00000622836 MYH11P35749 1972 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 CARNS1A5YM72 827 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 ARL5CA6NH57 179 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 K7ENM7 598 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 BCAR1P56945 870 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 KRT85P78386 507 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 GIT2Q14161 759 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 DCAF4L1Q3SXM0 396 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 EP400NLQ6ZTU2 488 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 DYMQ7RTS9 669 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 PPP2R3CQ969Q6 453 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 BICD1Q96G01 975 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 RPS6KC1Q96S38 1066 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 GAD1Q99259 594 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 TCHPQ9BT92 498 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 RNF39Q9H2S5 420 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 NSUN3Q9H649 340 aaKnown RBP15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 PRDM6Q9NQX0 595 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 SPG21Q9NZD8 308 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 THEGQ9P2T0 379 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 GIT1Q9Y2X7 761 aa15.36■□□□□ 0.05
PCDHGC3-208ENST00000622836 NT5C1B-RDH14C9J2C7 533 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 EDN1P05305 212 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 MATR3P43243 847 aaKnown RBP eCLIP15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 UBE3AQ05086 875 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 ZNF568Q3ZCX4 644 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 NT5DC1Q5TFE4 455 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 EEF1DP3Q658K8 133 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 TMEM161BQ8NDZ6 487 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 DHX58Q96C10 678 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 TMEM169Q96HH4 297 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 ZFP42Q96MM3 310 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 NTPCRQ9BSD7 190 aaKnown RBP15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 TARS2Q9BW92 718 aaKnown RBP15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 NRDE2Q9H7Z3 1164 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 TLR9Q9NR96 1032 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 FAM13BQ9NYF5 915 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 KLK14Q9P0G3 267 aa15.35■□□□□ 0.05
PCDHGC3-208ENST00000622836 TNFSF13BQ9Y275 285 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms