RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 NAB2Q15742 525 aa17.21■□□□□ 0.34
GABRB3-215ENST00000622697 GPR162Q16538 588 aa17.21■□□□□ 0.34
GABRB3-215ENST00000622697 PLA2G4FQ68DD2 849 aa17.21■□□□□ 0.34
GABRB3-215ENST00000622697 AGXT2Q9BYV1 514 aa17.21■□□□□ 0.34
GABRB3-215ENST00000622697 KDM6AO15550 1401 aaPredicted RBP17.2■□□□□ 0.34
GABRB3-215ENST00000622697 M0QYV0 167 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 RTN2O75298 545 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 PKN1Q16512 942 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 RPAP3Q9H6T3 665 aaPredicted RBP17.2■□□□□ 0.34
GABRB3-215ENST00000622697 VIPAS39Q9H9C1 493 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 SPATA31A1Q5TZJ5 1347 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 EPC2Q52LR7 807 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 RHOT1Q8IXI2 618 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 ELOA2Q8IYF1 753 aaPredicted RBP17.2■□□□□ 0.34
GABRB3-215ENST00000622697 KIF20BQ96Q89 1820 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 LONRF1Q17RB8 773 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 FBXW10Q5XX13 1052 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 JADE1Q6IE81 842 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 ANKMY2Q8IV38 441 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 PPM1NQ8N819 430 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 CAPN6Q9Y6Q1 641 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 SLC16A3O15427 465 aaKnown RBP17.2■□□□□ 0.34
GABRB3-215ENST00000622697 CALB1P05937 261 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 SEC24CP53992 1094 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 DNAAF5Q86Y56 855 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 CEP120Q8N960 986 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 LACRTQ9GZZ8 138 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 PCDHA10Q9Y5I2 948 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 USH1CQ9Y6N9 552 aa17.2■□□□□ 0.34
GABRB3-215ENST00000622697 FGFR2P21802 821 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
GABRB3-215ENST00000622697 PMS1P54277 932 aaKnown RBP17.19■□□□□ 0.34
GABRB3-215ENST00000622697 CATSPER4Q7RTX7 472 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 TMEM143Q96AN5 459 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 MTM1Q13496 603 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 RBBP5Q15291 538 aaKnown RBP17.19■□□□□ 0.34
GABRB3-215ENST00000622697 EXOC8Q8IYI6 725 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 SYT2Q8N9I0 419 aaPredicted RBP17.19■□□□□ 0.34
GABRB3-215ENST00000622697 PPLO60437 1756 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 A0A1W2PQJ5 194 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 RSPH10B2B2RC85 870 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 RSPH10BP0C881 870 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 ARPP19P56211 112 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 DHX34Q14147 1143 aaKnown RBP17.19■□□□□ 0.34
GABRB3-215ENST00000622697 ZC3H18Q86VM9 953 aaKnown RBP17.19■□□□□ 0.34
GABRB3-215ENST00000622697 ERGIC2Q96RQ1 377 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 FUT8Q9BYC5 575 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 TECPR2O15040 1411 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 TCRBV5S4A2TA0A5A2 114 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 KCNJ1P48048 391 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 MTMR2Q13614 643 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 RC3H1Q5TC82 1133 aaKnown RBP17.19■□□□□ 0.34
GABRB3-215ENST00000622697 ZNF473Q8WTR7 871 aaKnown RBP17.19■□□□□ 0.34
GABRB3-215ENST00000622697 CCT8L2Q96SF2 557 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 TRIM55Q9BYV6 548 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 SLC9A2Q9UBY0 812 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 ADGRB2O60241 1585 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 ARSEP51690 589 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 ICE2Q659A1 982 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 RPAINQ86UA6 219 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 PPWD1Q96BP3 646 aaKnown RBP17.19■□□□□ 0.34
GABRB3-215ENST00000622697 KLC2Q9H0B6 622 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 HOXC10Q9NYD6 342 aa17.19■□□□□ 0.34
GABRB3-215ENST00000622697 GOLGA8RI6L899 631 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 EIF3HO15372 352 aaKnown RBP eCLIP17.18■□□□□ 0.34
GABRB3-215ENST00000622697 HMGCS2P54868 508 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 GJD4Q96KN9 370 aaPredicted RBP17.18■□□□□ 0.34
GABRB3-215ENST00000622697 HERC5Q9UII4 1024 aaKnown RBP17.18■□□□□ 0.34
GABRB3-215ENST00000622697 GPR75-ASB3A0A0A6YYF3 556 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 KRT37O76014 449 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 CASP2P42575 452 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 KLHDC7AQ5VTJ3 777 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 C1orf228Q6PIY5 440 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 PSPC1Q8WXF1 523 aaKnown RBP17.18■□□□□ 0.34
GABRB3-215ENST00000622697 ANKS1AQ92625 1134 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 SLC13A1Q9BZW2 595 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 ECT2Q9H8V3 914 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 IP6K2Q9UHH9 426 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 A0A087X0T9 212 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 TFRCP02786 760 aaKnown RBP17.18■□□□□ 0.34
GABRB3-215ENST00000622697 FAM228BP0C875 321 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 SEMA6BQ9H3T3 888 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 FAM217BQ9NTX9 383 aaPredicted RBP17.18■□□□□ 0.34
GABRB3-215ENST00000622697 ZFP69BQ9UJL9 534 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 TCP11X1B4DZS4 312 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 GYG2O15488 501 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 CHN1P15882 459 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 H2AFXP16104 143 aaPredicted RBP17.18■□□□□ 0.34
GABRB3-215ENST00000622697 NFX1Q12986 1120 aaKnown RBP17.18■□□□□ 0.34
GABRB3-215ENST00000622697 SLC12A1Q13621 1099 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 RYBPQ8N488 228 aaPredicted RBP17.18■□□□□ 0.34
GABRB3-215ENST00000622697 PACSIN1Q9BY11 444 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 EPN3Q9H201 632 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 PIM2Q9P1W9 311 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 VWDEQ8N2E2 1590 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 MYO3BQ8WXR4 1341 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 DCTN3O75935 186 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 ERFP50548 548 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 EDRF1Q3B7T1 1238 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 RWDD4Q6NW29 188 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms