RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 ATP5OP48047 213 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 ACOT2P49753 483 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 IL9RQ01113 521 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 LMNB2Q03252 620 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 KRT81Q14533 505 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 SNCBQ16143 134 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 ECM1Q16610 540 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 FAM153CQ494X1 144 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 LRRC8CQ8TDW0 803 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 FAM151AQ8WW52 585 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 PI4K2AQ9BTU6 479 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 FAM153AQ9UHL3 310 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 IVNS1ABPQ9Y6Y0 642 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 KCPQ6ZWJ8 1503 aa13.75□□□□□ -0.21
MSH6-215ENST00000622629 PFASO15067 1338 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 TM4SF1P30408 202 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 YWHAGP61981 247 aaKnown RBP eCLIP13.74□□□□□ -0.21
MSH6-215ENST00000622629 MTMR2Q13614 643 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 MEI1Q5TIA1 1274 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 MOXD1Q6UVY6 613 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 FAM47EQ6ZV65 393 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 TBC1D1Q86TI0 1168 aaPredicted RBP13.74□□□□□ -0.21
MSH6-215ENST00000622629 MCUR1Q96AQ8 359 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 WNT8AQ9H1J5 351 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 SUCLA2Q9P2R7 463 aaPredicted RBP13.74□□□□□ -0.21
MSH6-215ENST00000622629 GAKO14976 1311 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 WDR91A4D1P6 747 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 RFX1P22670 979 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 SFNP31947 248 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 FAM160B1Q5W0V3 765 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 FBXW10Q5XX13 1052 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 JAMLQ86YT9 394 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 CPA5Q8WXQ8 436 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 CALR3Q96L12 384 aaKnown RBP13.74□□□□□ -0.21
MSH6-215ENST00000622629 FAM118BQ9BPY3 351 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 EPN3Q9H201 632 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 EHD4Q9H223 541 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 RPAP3Q9H6T3 665 aaPredicted RBP13.74□□□□□ -0.21
MSH6-215ENST00000622629 AIPL1Q9NZN9 384 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 PHF20L1A8MW92 1017 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 PLS3P13797 630 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 ANXA13P27216 316 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 BASP1P80723 227 aaKnown RBP13.74□□□□□ -0.21
MSH6-215ENST00000622629 SHROOM1Q2M3G4 852 aaPredicted RBP13.74□□□□□ -0.21
MSH6-215ENST00000622629 EAPPQ56P03 285 aaPredicted RBP13.74□□□□□ -0.21
MSH6-215ENST00000622629 RFX6Q8HWS3 928 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 ZNF473Q8WTR7 871 aaKnown RBP13.74□□□□□ -0.21
MSH6-215ENST00000622629 SLC35C1Q96A29 364 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 TSNARE1Q96NA8 513 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 ZWILCHQ9H900 591 aa13.74□□□□□ -0.21
MSH6-215ENST00000622629 POLRMTO00411 1230 aaKnown RBP13.73□□□□□ -0.21
MSH6-215ENST00000622629 PLSCR1O15162 318 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 RPSAP08865 295 aaKnown RBP13.73□□□□□ -0.21
MSH6-215ENST00000622629 CA4P22748 312 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 PHBP35232 272 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 DHX34Q14147 1143 aaKnown RBP13.73□□□□□ -0.21
MSH6-215ENST00000622629 BBS9Q3SYG4 887 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 PRAMEF18Q5VWM3 479 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 ARHGEF18Q6ZSZ5 1173 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 VPS52Q8N1B4 723 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 BAP1Q92560 729 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 FAM81BQ96LP2 452 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 POLR3FQ9H1D9 316 aaPredicted RBP13.73□□□□□ -0.21
MSH6-215ENST00000622629 SAYSD1Q9NPB0 183 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 A0A1B0GUA9 196 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 PCK1P35558 622 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 C2CD6Q53TS8 623 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 TSEN2Q8NCE0 465 aaKnown RBP13.73□□□□□ -0.21
MSH6-215ENST00000622629 RIT2Q99578 217 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 FGFBP2Q9BYJ0 223 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 ADAM33Q9BZ11 813 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 GOLGA8MH3BSY2 632 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 ZNF263O14978 683 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 TLR3O15455 904 aaKnown RBP13.73□□□□□ -0.21
MSH6-215ENST00000622629 TROVE2P10155 538 aaKnown RBP eCLIP13.73□□□□□ -0.21
MSH6-215ENST00000622629 HMGCS2P54868 508 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 RPS6P62753 249 aaKnown RBP13.73□□□□□ -0.21
MSH6-215ENST00000622629 ITIH3Q06033 890 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 MMS22LQ6ZRQ5 1243 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 ZNF720Q7Z2F6 126 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 BTBD6Q96KE9 485 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 ERP44Q9BS26 406 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 KLHL11Q9NVR0 708 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 STRCQ7RTU9 1775 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 PI4K2BG5E9Z4 385 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 MEFVO15553 781 aaPredicted RBP13.73□□□□□ -0.21
MSH6-215ENST00000622629 SLC26A4O43511 780 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 P4HA1P13674 534 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 KRT17Q04695 432 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 ERICH1Q86X53 443 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 STMN2Q93045 179 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 GMCL1Q96IK5 515 aa13.73□□□□□ -0.21
MSH6-215ENST00000622629 F8VZ95 297 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 BRAFP15056 766 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 DPEP1P16444 411 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 GNA15P30679 374 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 CBWD2Q8IUF1 395 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 MDM1Q8TC05 714 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 TMEM143Q96AN5 459 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 CHMP6Q96FZ7 201 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms