RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 MYBPC2Q14324 1141 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 CCDC40Q4G0X9 1142 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 PRIMPOLQ96LW4 560 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 AP5Z1O43299 807 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 GNA14O95837 355 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 GARTP22102 1010 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 CASP4P49662 377 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 FANCCQ00597 558 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 AMHR2Q16671 573 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 TRIM71Q2Q1W2 868 aaKnown RBP19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 ATF7IP2Q5U623 682 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 SLFN12LQ6IEE8 588 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 SLC39A5Q6ZMH5 540 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 CATSPER4Q7RTX7 472 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 FAM126BQ8IXS8 530 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 TMEM40Q8WWA1 233 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 ZBTB45Q96K62 511 aaPredicted RBP19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 FRMD4BQ9Y2L6 1034 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 MROH7Q68CQ1 1323 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 CNTNAP2Q9UHC6 1331 aa19.47■□□□□ 0.71
PTCHD3-202ENST00000622555 SLC16A3O15427 465 aaKnown RBP19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 TSPAN1O60635 241 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 PQBP1O60828 265 aaKnown RBP19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 TOM1L1O75674 476 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 AKAP3O75969 853 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 CHRNA1P02708 482 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 EPB41P11171 864 aaKnown RBP19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 COL6A1P12109 1028 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 SFPQP23246 707 aaKnown RBP eCLIP19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 MTIF2P46199 727 aaKnown RBP19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 KRT31Q15323 416 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 SARM1Q6SZW1 724 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 TSHZ1Q6ZSZ6 1077 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 XXYLT1Q8NBI6 393 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 TMEM174Q8WUU8 243 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 TCHPQ9BT92 498 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 TRIM5Q9C035 493 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 STYXL1Q9Y6J8 313 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 DNAH12Q6ZR08 3092 aa19.46■□□□□ 0.71
PTCHD3-202ENST00000622555 CLDN3O15551 220 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 PSMC2P35998 433 aaKnown RBP19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 MGAT3Q09327 533 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 PCBP1Q15365 356 aaKnown RBP eCLIP19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 SAAL1Q96ER3 474 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 CPB2Q96IY4 423 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 C11orf49Q9H6J7 331 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 TAB2Q9NYJ8 693 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 LIMA1Q9UHB6 759 aaKnown RBP19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 GOLGA8IPA6NC78 632 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 GOLGA8JA6NMD2 632 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 TLR3O15455 904 aaKnown RBP19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 CAND2O75155 1236 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 HARSP12081 509 aaKnown RBP19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 CAPN2P17655 700 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 ARF4P18085 180 aaPredicted RBP19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 NCBP1Q09161 790 aaKnown RBP19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 MPZL3Q6UWV2 235 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 ZBTB33Q86T24 672 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 FAM186BQ8IYM0 893 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 ZSWIM2Q8NEG5 633 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 PAWRQ96IZ0 340 aaKnown RBP19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 MKNK1Q9BUB5 465 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 MSTO1Q9BUK6 570 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 IFNKQ9P0W0 207 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 AGO2Q9UKV8 859 aaKnown RBP19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 TNFSF13BQ9Y275 285 aa19.45■□□□□ 0.7
PTCHD3-202ENST00000622555 A0A0B4J269 797 aa19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 CD4P01730 458 aa19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 CKBP12277 381 aa19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 UBASH3AP57075 661 aa19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 ZNF568Q3ZCX4 644 aa19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 HS1BP3Q53T59 392 aa19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 ZNF618Q5T7W0 954 aa19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 CDR2LQ86X02 465 aaPredicted RBP19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 GPD1LQ8N335 351 aa19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 CCDC155Q8N6L0 562 aa19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 RDH13Q8NBN7 331 aa19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 TUBGCP2Q9BSJ2 902 aa19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 HAPLN2Q9GZV7 340 aa19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 ARMCX3Q9UH62 379 aaPredicted RBP19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 NOC2LQ9Y3T9 749 aaKnown RBP19.44■□□□□ 0.7
PTCHD3-202ENST00000622555 KIAA0391O15091 583 aaKnown RBP19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 TPM2P07951 284 aa19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 PRKCSHP14314 528 aaPredicted RBP19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 PROZP22891 400 aa19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 COPB1P53618 953 aaKnown RBP19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 NOLC1Q14978 699 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 TRIM60Q495X7 471 aa19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 FAM26DQ5JW98 314 aa19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 EEF1DP3Q658K8 133 aa19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 APTXQ7Z2E3 356 aaKnown RBP19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 ANKRD33Q7Z3H0 272 aa19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 FRMD5Q7Z6J6 570 aa19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 CAGE1Q8TC20 777 aa19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 VPS16Q9H269 839 aa19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 PDZD7Q9H5P4 517 aa19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 METTL14Q9HCE5 456 aaKnown RBP19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 PTPRHQ9HD43 1115 aa19.43■□□□□ 0.7
PTCHD3-202ENST00000622555 DCDC2CA8MYV0 355 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 ABLIM1O14639 778 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms