RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 MARCKSP29966 332 aaPredicted RBP23.35■■□□□ 1.33
PMPCA-212ENST00000622209 UBA7P41226 1012 aa23.35■■□□□ 1.33
PMPCA-212ENST00000622209 MXD4Q14582 209 aaPredicted RBP23.35■■□□□ 1.33
PMPCA-212ENST00000622209 SMC1AQ14683 1233 aaKnown RBP23.35■■□□□ 1.33
PMPCA-212ENST00000622209 SYCE2Q6PIF2 218 aa23.35■■□□□ 1.33
PMPCA-212ENST00000622209 MRPL43Q8N983 215 aaKnown RBP23.35■■□□□ 1.33
PMPCA-212ENST00000622209 MCPH1Q8NEM0 835 aa23.35■■□□□ 1.33
PMPCA-212ENST00000622209 TRAIPQ9BWF2 469 aa23.35■■□□□ 1.33
PMPCA-212ENST00000622209 IFT122Q9HBG6 1241 aa23.35■■□□□ 1.33
PMPCA-212ENST00000622209 FAM105AQ9NUU6 356 aa23.35■■□□□ 1.33
PMPCA-212ENST00000622209 FBXO2Q9UK22 296 aaPredicted RBP23.35■■□□□ 1.33
PMPCA-212ENST00000622209 C2orf71A6NGG8 1288 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 USO1O60763 962 aaKnown RBP23.34■■□□□ 1.33
PMPCA-212ENST00000622209 ZC3H11AO75152 810 aaKnown RBP eCLIP23.34■■□□□ 1.33
PMPCA-212ENST00000622209 CXCL14O95715 111 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 SKIP12755 728 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 CYP11B2P19099 503 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 GRIN1Q05586 938 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 LAMTOR4Q0VGL1 99 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 CBX2Q14781 532 aaPredicted RBP23.34■■□□□ 1.33
PMPCA-212ENST00000622209 STK38Q15208 465 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 PADI6Q6TGC4 694 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 GLB1LQ6UWU2 654 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 LINC00301Q8NCQ3 95 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 CALML4Q96GE6 196 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 CDK5RAP3Q96JB5 506 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 PNMA5Q96PV4 448 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 BHMT2Q9H2M3 363 aa23.34■■□□□ 1.33
PMPCA-212ENST00000622209 TFIP11Q9UBB9 837 aaKnown RBP23.34■■□□□ 1.33
PMPCA-212ENST00000622209 YEATS4O95619 227 aa23.33■■□□□ 1.33
PMPCA-212ENST00000622209 HOXD11P31277 338 aaPredicted RBP23.33■■□□□ 1.33
PMPCA-212ENST00000622209 ARL2P36404 184 aa23.33■■□□□ 1.33
PMPCA-212ENST00000622209 ZRSR1Q15695 479 aaKnown RBP23.33■■□□□ 1.33
PMPCA-212ENST00000622209 NOMO2Q5JPE7 1267 aa23.33■■□□□ 1.33
PMPCA-212ENST00000622209 KRI1Q8N9T8 703 aaKnown RBP23.33■■□□□ 1.33
PMPCA-212ENST00000622209 TMEM169Q96HH4 297 aa23.33■■□□□ 1.33
PMPCA-212ENST00000622209 GBP3Q9H0R5 595 aa23.33■■□□□ 1.33
PMPCA-212ENST00000622209 CSRNP2Q9H175 543 aa23.33■■□□□ 1.33
PMPCA-212ENST00000622209 CFAP45Q9UL16 551 aa23.33■■□□□ 1.33
PMPCA-212ENST00000622209 E9PMD0 336 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 CLASP2O75122 1294 aaKnown RBP23.32■■□□□ 1.32
PMPCA-212ENST00000622209 PPP6R2O75170 966 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 OFD1O75665 1012 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 RNASELQ05823 741 aaKnown RBP23.32■■□□□ 1.32
PMPCA-212ENST00000622209 POU5F1BQ06416 359 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 TMEM119Q4V9L6 283 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 TMEM173Q86WV6 379 aaPredicted RBP23.32■■□□□ 1.32
PMPCA-212ENST00000622209 VPS52Q8N1B4 723 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 AUTS2Q8WXX7 1259 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 MFSD14AQ96MC6 490 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 CCSER1Q9C0I3 900 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 NRDE2Q9H7Z3 1164 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 MINDY3Q9H8M7 445 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 TBC1D13Q9NVG8 400 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 CDH22Q9UJ99 828 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 ZDHHC9Q9Y397 364 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 PCDHB2Q9Y5E7 798 aa23.32■■□□□ 1.32
PMPCA-212ENST00000622209 SPTLC2O15270 562 aa23.31■■□□□ 1.32
PMPCA-212ENST00000622209 ZNF623O75123 536 aa23.31■■□□□ 1.32
PMPCA-212ENST00000622209 SP100P23497 879 aaPredicted RBP23.31■■□□□ 1.32
PMPCA-212ENST00000622209 RAB27AP51159 221 aa23.31■■□□□ 1.32
PMPCA-212ENST00000622209 ZXDAP98168 799 aa23.31■■□□□ 1.32
PMPCA-212ENST00000622209 TFDP1Q14186 410 aa23.31■■□□□ 1.32
PMPCA-212ENST00000622209 BMS1Q14692 1282 aaKnown RBP23.31■■□□□ 1.32
PMPCA-212ENST00000622209 TRIM67Q6ZTA4 783 aa23.31■■□□□ 1.32
PMPCA-212ENST00000622209 KCNK18Q7Z418 384 aa23.31■■□□□ 1.32
PMPCA-212ENST00000622209 SRGAP1Q7Z6B7 1085 aa23.31■■□□□ 1.32
PMPCA-212ENST00000622209 CASP10Q92851 521 aa23.31■■□□□ 1.32
PMPCA-212ENST00000622209 PGBD4Q96DM1 585 aa23.31■■□□□ 1.32
PMPCA-212ENST00000622209 POLR3FQ9H1D9 316 aaPredicted RBP23.31■■□□□ 1.32
PMPCA-212ENST00000622209 AGPAT5Q9NUQ2 364 aa23.31■■□□□ 1.32
PMPCA-212ENST00000622209 HCFC2Q9Y5Z7 792 aa23.31■■□□□ 1.32
PMPCA-212ENST00000622209 MUC6Q6W4X9 2439 aa23.3■■□□□ 1.32
PMPCA-212ENST00000622209 MYH15Q9Y2K3 1946 aa23.3■■□□□ 1.32
PMPCA-212ENST00000622209 TMEM221A6NGB7 291 aa23.3■■□□□ 1.32
PMPCA-212ENST00000622209 M0R296 226 aa23.3■■□□□ 1.32
PMPCA-212ENST00000622209 GALTP07902 379 aa23.3■■□□□ 1.32
PMPCA-212ENST00000622209 HOXB8P17481 243 aaPredicted RBP23.3■■□□□ 1.32
PMPCA-212ENST00000622209 FOXD4L6Q3SYB3 417 aaPredicted RBP23.3■■□□□ 1.32
PMPCA-212ENST00000622209 FOXD4L3Q6VB84 417 aaPredicted RBP23.3■■□□□ 1.32
PMPCA-212ENST00000622209 TMEM87AQ8NBN3 555 aa23.3■■□□□ 1.32
PMPCA-212ENST00000622209 RNF149Q8NC42 400 aa23.3■■□□□ 1.32
PMPCA-212ENST00000622209 BCL7CQ8WUZ0 217 aaPredicted RBP23.3■■□□□ 1.32
PMPCA-212ENST00000622209 IGSF21Q96ID5 467 aa23.3■■□□□ 1.32
PMPCA-212ENST00000622209 FBXL18Q96ME1 805 aa23.3■■□□□ 1.32
PMPCA-212ENST00000622209 CLIC6Q96NY7 704 aa23.3■■□□□ 1.32
PMPCA-212ENST00000622209 DNAJB4Q9UDY4 337 aa23.3■■□□□ 1.32
PMPCA-212ENST00000622209 DAXXQ9UER7 740 aaPredicted RBP23.3■■□□□ 1.32
PMPCA-212ENST00000622209 ATP6V1DQ9Y5K8 247 aa23.3■■□□□ 1.32
PMPCA-212ENST00000622209 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.29■■□□□ 1.32
PMPCA-212ENST00000622209 GLRA2P23416 452 aa23.29■■□□□ 1.32
PMPCA-212ENST00000622209 HOXA11P31270 313 aaPredicted RBP23.29■■□□□ 1.32
PMPCA-212ENST00000622209 SLC11A1P49279 550 aa23.29■■□□□ 1.32
PMPCA-212ENST00000622209 TPRNQ4KMQ1 711 aa23.29■■□□□ 1.32
PMPCA-212ENST00000622209 AGMOQ6ZNB7 445 aa23.29■■□□□ 1.32
PMPCA-212ENST00000622209 MAEAQ7L5Y9 396 aa23.29■■□□□ 1.32
PMPCA-212ENST00000622209 ZNF280BQ86YH2 543 aa23.29■■□□□ 1.32
PMPCA-212ENST00000622209 SYT2Q8N9I0 419 aaPredicted RBP23.29■■□□□ 1.32
PMPCA-212ENST00000622209 ASAP3Q8TDY4 903 aa23.29■■□□□ 1.32
PMPCA-212ENST00000622209 EPSTI1Q96J88 318 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms