RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 CCDC88AQ3V6T2 1871 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 NAV1Q8NEY1 1877 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SNED1Q8TER0 1413 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 hCG_2014768A0A024R1R8 64 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 PSMA7O14818 248 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 LSM1O15116 133 aaKnown RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 NCK2O43639 380 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 CCNFP41002 786 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 UBA7P41226 1012 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 RAB15P59190 212 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 ARPC4P59998 168 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 PSMC1P62191 440 aaKnown RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 TCERG1LQ5VWI1 586 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 SNX30Q5VWJ9 437 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 PTF1AQ7RTS3 328 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 KRT26Q7Z3Y9 468 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 NELFCDQ8IXH7 590 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 CSGALNACT2Q8N6G5 542 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 PDCD7Q8N8D1 485 aaKnown RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 DAGLBQ8NCG7 672 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 KIAA0895Q8NCT3 520 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 SCG3Q8WXD2 468 aaKnown RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 SEC14L1Q92503 715 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 MS4A14Q96JA4 679 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 AGBL1Q96MI9 1066 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 ZMAT2Q96NC0 199 aaKnown RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 PSMB7Q99436 277 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 CGREF1Q99674 301 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 ZNF184Q99676 751 aaPredicted RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 HNRNPABQ99729 332 aaKnown RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 TRIM9Q9C026 710 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 CCSER1Q9C0I3 900 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 ASCC2Q9H1I8 757 aaPredicted RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 TAOK3Q9H2K8 898 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 BARHL2Q9NY43 387 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 STK32BQ9NY57 414 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 KLHL14Q9P2G3 628 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 TRIM33Q9UPN9 1127 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 ROBO3Q96MS0 1386 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 UMODL1Q5DID0 1318 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 MYPNQ86TC9 1320 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 CCDC188H7C350 402 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 TRAFD1O14545 582 aaPredicted RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 MAP3K7O43318 606 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 PIM1P11309 404 aaPredicted RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 USP11P51784 963 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 KIF11P52732 1056 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 RPS8P62241 208 aaKnown RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 DCTN2Q13561 401 aaKnown RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 CNGA2Q16280 664 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 CCDC153Q494R4 210 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 SH3D19Q5HYK7 790 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 BTNL9Q6UXG8 535 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 CABP7Q86V35 215 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 AMIGO3Q86WK7 504 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 DGKHQ86XP1 1220 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 DZIP1Q86YF9 867 aaKnown RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 SLC17A8Q8NDX2 589 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 ANKS1AQ92625 1134 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 P2RX5Q93086 422 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 ITPKCQ96DU7 683 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 MPP4Q96JB8 637 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 GPR101Q96P66 508 aaPredicted RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 TMEM109Q9BVC6 243 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 TXLNGYQ9BZA5 131 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 SLITRK6Q9H5Y7 841 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 TLE6Q9H808 572 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 PFDN4Q9NQP4 134 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 BTBD7Q9P203 1132 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 KIAA1522Q9P206 1035 aaPredicted RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 ZNF212Q9UDV6 495 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 SAP30BPQ9UHR5 308 aaKnown RBP8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 ZNF180Q9UJW8 692 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 FADS3Q9Y5Q0 445 aa8.03□□□□□ -1.12
TRIM49B-202ENST00000622138 COL24A1Q17RW2 1714 aa8.02□□□□□ -1.12
TRIM49B-202ENST00000622138 DDX60LQ5H9U9 1706 aaKnown RBP8.02□□□□□ -1.12
TRIM49B-202ENST00000622138 KANSL1LA0AUZ9 987 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 RGS16O15492 202 aaPredicted RBP8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 OR52Z1P0C646 297 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 CCNE1P24864 410 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 ASIC1P78348 528 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 SLC34A1Q06495 639 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 PDE4DQ08499 809 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 C6orf118Q5T5N4 469 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 CLEC4GQ6UXB4 293 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 PASD1Q8IV76 773 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 TMEM47Q9BQJ4 181 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 NEUROG2Q9H2A3 272 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 SEMA6BQ9H3T3 888 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 QPCTLQ9NXS2 382 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 MAGEC2Q9UBF1 373 aaPredicted RBP8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 SEC63Q9UGP8 760 aaKnown RBP8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 NR2E3Q9Y5X4 410 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 CDK5RAP2Q96SN8 1893 aa8.02□□□□□ -1.13
TRIM49B-202ENST00000622138 H0Y3Z8 333 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 CAPN15O75808 1086 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 S100A1P23297 94 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 MTIF2P46199 727 aaKnown RBP8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 ITGA7Q13683 1181 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 GIT2Q14161 759 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms