RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CPEB1Q9BZB8 566 aaKnown RBP6.2□□□□□ -1.42
BRCA1-229ENST00000621897 MMRN2Q9H8L6 949 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 SLC2A4RGQ9NR83 387 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 PARPBPQ9NWS1 579 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 DPP7Q9UHL4 492 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 GRXCR1A8MXD5 290 aa6.19□□□□□ -1.42
BRCA1-229ENST00000621897 BRINP1O60477 761 aa6.19□□□□□ -1.42
BRCA1-229ENST00000621897 FAM20BO75063 409 aa6.19□□□□□ -1.42
BRCA1-229ENST00000621897 VIL1P09327 827 aaKnown RBP6.19□□□□□ -1.42
BRCA1-229ENST00000621897 POU3F3P20264 500 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-229ENST00000621897 CANXP27824 592 aaKnown RBP6.19□□□□□ -1.42
BRCA1-229ENST00000621897 ABHD18Q0P651 414 aa6.19□□□□□ -1.42
BRCA1-229ENST00000621897 MRPL49Q13405 166 aaKnown RBP6.19□□□□□ -1.42
BRCA1-229ENST00000621897 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.19□□□□□ -1.42
BRCA1-229ENST00000621897 CT47A1Q5JQC4 288 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-229ENST00000621897 KRT26Q7Z3Y9 468 aa6.19□□□□□ -1.42
BRCA1-229ENST00000621897 ACAP3Q96P50 834 aa6.19□□□□□ -1.42
BRCA1-229ENST00000621897 EPC1Q9H2F5 836 aa6.19□□□□□ -1.42
BRCA1-229ENST00000621897 CTSSP25774 331 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 GZMKP49863 264 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 WNT3AP56704 352 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 CCT2P78371 535 aaKnown RBP6.18□□□□□ -1.42
BRCA1-229ENST00000621897 CDK17Q00537 523 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 EGFLAMQ63HQ2 1017 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 NAIF1Q69YI7 327 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-229ENST00000621897 XYLT1Q86Y38 959 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 ZNF483Q8TF39 744 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-229ENST00000621897 TSPEARQ8WU66 669 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 SNX33Q8WV41 574 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 LMBR1Q8WVP7 490 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 CPPED1Q9BRF8 314 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-229ENST00000621897 MRIQ9BWK5 157 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 GPRC5BQ9NZH0 403 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 TRPS1Q9UHF7 1281 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 ZMYM3Q14202 1370 aa6.18□□□□□ -1.42
BRCA1-229ENST00000621897 GOLGA6L6A8MZA4 724 aa6.17□□□□□ -1.42
BRCA1-229ENST00000621897 GYPEP15421 78 aa6.17□□□□□ -1.42
BRCA1-229ENST00000621897 HMGA2P52926 109 aa6.17□□□□□ -1.42
BRCA1-229ENST00000621897 SCAND1P57086 179 aa6.17□□□□□ -1.42
BRCA1-229ENST00000621897 FHL2Q14192 279 aa6.17□□□□□ -1.42
BRCA1-229ENST00000621897 CSRP2Q16527 193 aa6.17□□□□□ -1.42
BRCA1-229ENST00000621897 DCAF17Q5H9S7 520 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-229ENST00000621897 IQSEC1Q6DN90 963 aa6.17□□□□□ -1.42
BRCA1-229ENST00000621897 ZNF662Q6ZS27 426 aa6.17□□□□□ -1.42
BRCA1-229ENST00000621897 OR52N2Q8NGI0 321 aa6.17□□□□□ -1.42
BRCA1-229ENST00000621897 QRSL1Q9H0R6 528 aaKnown RBP6.17□□□□□ -1.42
BRCA1-229ENST00000621897 REXO2Q9Y3B8 237 aaKnown RBP6.17□□□□□ -1.42
BRCA1-229ENST00000621897 GOLGA8AA7E2F4 631 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 DNAJC6O75061 913 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 ITGA10O75578 1167 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 RPS6KA4O75676 772 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 PRKD3O94806 890 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 NR4A1P22736 598 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 CNGA1P29973 690 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 MCM7P33993 719 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 MEF2AQ02078 507 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-229ENST00000621897 C19orf54Q5BKX5 351 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 RABL3Q5HYI8 236 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 ANKS6Q68DC2 871 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 GLB1L3Q8NCI6 653 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-229ENST00000621897 MDM1Q8TC05 714 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 COG1Q8WTW3 980 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 LARP4BQ92615 738 aaKnown RBP6.16□□□□□ -1.42
BRCA1-229ENST00000621897 CLIP3Q96DZ5 547 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 ORAI2Q96SN7 254 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 PDCD2LQ9BRP1 358 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 C14orf119Q9NWQ9 140 aa6.16□□□□□ -1.42
BRCA1-229ENST00000621897 GPR39O43194 453 aa6.15□□□□□ -1.42
BRCA1-229ENST00000621897 ADCY6O43306 1168 aa6.15□□□□□ -1.42
BRCA1-229ENST00000621897 APBA1Q02410 837 aa6.15□□□□□ -1.42
BRCA1-229ENST00000621897 DOK3Q7L591 496 aa6.15□□□□□ -1.42
BRCA1-229ENST00000621897 ZNF627Q7L945 461 aa6.15□□□□□ -1.42
BRCA1-229ENST00000621897 KCNK18Q7Z418 384 aa6.15□□□□□ -1.42
BRCA1-229ENST00000621897 FAM83AQ86UY5 434 aa6.15□□□□□ -1.42
BRCA1-229ENST00000621897 NEU4Q8WWR8 484 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-229ENST00000621897 CEP95Q96GE4 821 aa6.15□□□□□ -1.42
BRCA1-229ENST00000621897 RAX2Q96IS3 184 aa6.15□□□□□ -1.42
BRCA1-229ENST00000621897 GPRC5DQ9NZD1 345 aa6.15□□□□□ -1.42
BRCA1-229ENST00000621897 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.15□□□□□ -1.42
BRCA1-229ENST00000621897 SORCS3Q9UPU3 1222 aa6.15□□□□□ -1.42
BRCA1-229ENST00000621897 WNT10BO00744 389 aa6.14□□□□□ -1.43
BRCA1-229ENST00000621897 PEX11BO96011 259 aa6.14□□□□□ -1.43
BRCA1-229ENST00000621897 MRPS9P82933 396 aaKnown RBP6.14□□□□□ -1.43
BRCA1-229ENST00000621897 SRSF2Q01130 221 aaKnown RBP6.14□□□□□ -1.43
BRCA1-229ENST00000621897 VPS72Q15906 364 aa6.14□□□□□ -1.43
BRCA1-229ENST00000621897 MUM1Q2TAK8 710 aa6.14□□□□□ -1.43
BRCA1-229ENST00000621897 TOR2AQ5JU69 321 aa6.14□□□□□ -1.43
BRCA1-229ENST00000621897 PRAMEF14Q5SWL7 426 aa6.14□□□□□ -1.43
BRCA1-229ENST00000621897 GPRIN1Q7Z2K8 1008 aa6.14□□□□□ -1.43
BRCA1-229ENST00000621897 WDR66Q8TBY9 1149 aa6.14□□□□□ -1.43
BRCA1-229ENST00000621897 AUTS2Q8WXX7 1259 aa6.14□□□□□ -1.43
BRCA1-229ENST00000621897 RIN2Q8WYP3 895 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-229ENST00000621897 CDC5LQ99459 802 aaKnown RBP6.14□□□□□ -1.43
BRCA1-229ENST00000621897 TRIM8Q9BZR9 551 aa6.14□□□□□ -1.43
BRCA1-229ENST00000621897 ZNF768Q9H5H4 540 aaKnown RBP6.14□□□□□ -1.43
BRCA1-229ENST00000621897 CLSTN1O94985 981 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 MAKP20794 623 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 ZFP36P26651 326 aaKnown RBP6.13□□□□□ -1.43
BRCA1-229ENST00000621897 ADSLP30566 484 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-229ENST00000621897 APOBEC3AP31941 199 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms